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解析转录因子 Cra 的调控机制及应用前景

Insights into the regulatory mechanisms and application prospects of the transcription factor Cra.

机构信息

Cooperative Innovation Center of Industrial Fermentation (Ministry of Education & Hubei Province), Key Laboratory of Fermentation Engineering (Ministry of Education), Hubei Key Laboratory of Industrial Microbiology, National "111" Center for Cellular Regulation and Molecular Pharmaceutics, Hubei University of Technology, Wuhan, China.

State Key Laboratory of MicrobialTechnology, University, Qingdao, China.

出版信息

Appl Environ Microbiol. 2024 Nov 20;90(11):e0122824. doi: 10.1128/aem.01228-24. Epub 2024 Nov 4.

DOI:10.1128/aem.01228-24
PMID:39494897
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11577769/
Abstract

Cra (catabolite repressor/activator) is a global transcription factor (TF) that plays a pleiotropic role in controlling the transcription of several genes involved in carbon utilization and energy metabolism. Multiple studies have investigated the regulatory mechanism of Cra and its rational use for metabolic regulation, but due to the complexity of its regulation, there remain challenges in the efficient use of Cra. Here, the structure, mechanism of action, and regulatory function of Cra in carbon and nitrogen flow are reviewed. In addition, this paper highlights the application of Cra in metabolic engineering, including the promotion of metabolite biosynthesis, the regulation of stress tolerance and virulence, the use of a Cra-based biosensor, and its coupling with other transcription factors. Finally, the prospects of Cra-related regulatory strategies are discussed. This review provides guidance for the rational design and construction of Cra-based metabolic regulation systems.

摘要

Cra(分解代谢物阻遏物/激活物)是一种全局转录因子(TF),在控制参与碳利用和能量代谢的几个基因的转录中发挥着多效性作用。多项研究已经调查了 Cra 的调节机制及其在代谢调节中的合理利用,但由于其调节的复杂性,在有效利用 Cra 方面仍然存在挑战。在这里,我们回顾了 Cra 在碳氮流中的结构、作用机制和调节功能。此外,本文还强调了 Cra 在代谢工程中的应用,包括促进代谢物生物合成、调节应激耐受性和毒力、使用基于 Cra 的生物传感器以及与其他转录因子的偶联。最后,讨论了与 Cra 相关的调控策略的前景。本综述为基于 Cra 的代谢调控系统的合理设计和构建提供了指导。

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Insights into the regulatory mechanisms and application prospects of the transcription factor Cra.解析转录因子 Cra 的调控机制及应用前景
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Arch Microbiol. 2025 Apr 1;207(5):105. doi: 10.1007/s00203-025-04290-7.

本文引用的文献

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Transcription factor-based biosensor: A molecular-guided approach for advanced biofuel synthesis.基于转录因子的生物传感器:用于先进生物燃料合成的分子导向方法。
Biotechnol Adv. 2024 May-Jun;72:108339. doi: 10.1016/j.biotechadv.2024.108339. Epub 2024 Mar 18.
2
RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12.RegulonDB v12.0:大肠杆菌 K-12 转录调控的综合资源。
Nucleic Acids Res. 2024 Jan 5;52(D1):D255-D264. doi: 10.1093/nar/gkad1072.
3
Mechanisms and biotechnological applications of transcription factors.转录因子的作用机制及生物技术应用
Synth Syst Biotechnol. 2023 Aug 31;8(4):565-577. doi: 10.1016/j.synbio.2023.08.006. eCollection 2023 Dec.
4
Applications and Tuning Strategies for Transcription Factor-Based Metabolite Biosensors.基于转录因子的代谢物生物传感器的应用和调谐策略。
Biosensors (Basel). 2023 Mar 28;13(4):428. doi: 10.3390/bios13040428.
5
Functional and structural diversification of incomplete phosphotransferase system in cellulose-degrading clostridia.纤维素降解梭菌中不完全磷酸转移酶系统的功能和结构多样化。
ISME J. 2023 Jun;17(6):823-835. doi: 10.1038/s41396-023-01392-2. Epub 2023 Mar 10.
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Cyclic di-GMP Modulates a Metabolic Flux for Carbon Utilization in Salmonella enterica Serovar Typhimurium.环二鸟苷酸调节鼠伤寒沙门氏菌碳利用的代谢通量。
Microbiol Spectr. 2023 Feb 6;11(2):e0368522. doi: 10.1128/spectrum.03685-22.
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De novo design of the global transcriptional factor Cra-regulated promoters enables highly sensitive glycolysis flux biosensor for dynamic metabolic control.从头设计全局转录因子 Cra 调控启动子,实现了高灵敏度的糖酵解通量生物传感器,用于动态代谢控制。
Microb Biotechnol. 2023 Mar;16(3):605-617. doi: 10.1111/1751-7915.14166. Epub 2022 Dec 20.
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Engineering of global transcription factor FruR to redirect the carbon flow in Escherichia coli for enhancing L-phenylalanine biosynthesis.工程化全局转录因子 FruR 以重新引导大肠杆菌中的碳流,用于增强 L-苯丙氨酸生物合成。
Microb Cell Fact. 2022 Oct 26;21(1):222. doi: 10.1186/s12934-022-01954-7.
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Environ Microbiol. 2022 Nov;24(11):5425-5436. doi: 10.1111/1462-2920.16244. Epub 2022 Oct 25.
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Evaluation of Typhimurium Lacking , , or as a Prophylactic Vaccine against Lethal Infection.对缺乏、或的鼠伤寒沙门氏菌作为预防致死性感染疫苗的评估。
Vaccines (Basel). 2022 Aug 28;10(9):1413. doi: 10.3390/vaccines10091413.