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伊拉克牛中 的首次分子系统发育分析。

First molecular phylogeny of in Iraqi cattle.

机构信息

Department of Biology, College of Education, University of Al-Qadisiyah, Al-Qadisiyah, Iraq.

Department of Internal and Preventive Veterinary Medicine, University of Wasit, Kut, Iraq.

出版信息

Open Vet J. 2024 Sep;14(9):2361-2367. doi: 10.5455/OVJ.2024.v14.i9.24. Epub 2024 Sep 30.

Abstract

BACKGROUND

is one of the most neglected fastidious intracellular bacterial pathogens that infect a wide range of wild and domestic animals, including cattle.

AIM

Detection of the prevalence of in cattle using molecular assay, identification of the relationship of infection to animal risk factors (age and sex), and sequencing of isolates to be analyzed phylogenetically and reported in the National Centre For Biotechnology Information (NCBI).

METHODS

A total of 290 cattle were selected randomly from different rural areas in Wasit province from September to December (2023), and subjected to collecting venous blood samples that were tested molecularly by the polymerase chain reaction (PCR). Phylogenetic analysis was conducted using the MEGA 7 Software.

RESULTS

Targeting the gene, 7.24% of the study cattle tested positive for . In terms of age, positivity rates, odds ratios (ORs), and relative risks (RRs) were significantly higher in cattle older than 7 years compared to other age groups: under 1 year, 1-3 years, and 3-7 years. Regarding sex, there was no significant variation in positive rates between females (7.48%) and males (5.56%); however, the OR and RR values indicated that females (1.376 and 1.345, respectively) were at a higher risk of infection than males (0.727 and 0.743, respectively). Phylogenetic tree analysis of five local isolates demonstrated their identity with the France strain/isolate at total genetic identity ranging from 99.64% to 99.98%.

CONCLUSION

To the best of our knowledge, this study represents the first molecular identification of the prevalence rate of in cattle in Iraq using PCR assay and confirms phylogenetically the local isolates in NCBI-BLAST. Therefore, additional information about the prevalence, genetic diversity in domestic and wild animals, and arthropod vectors is crucial for developing strategies for the prevention and control of infections.

摘要

背景

绵羊泰勒虫是一种最容易被忽视的严格细胞内细菌病原体,它感染范围广泛,包括牛在内的多种野生和家养动物。

目的

使用分子检测方法检测牛中绵羊泰勒虫的流行率,确定感染与动物风险因素(年龄和性别)的关系,并对分离株进行测序,以便在国家生物技术信息中心(NCBI)进行系统发生分析和报告。

方法

2023 年 9 月至 12 月期间,从伊拉克瓦西特省不同农村地区随机选择了 290 头牛,采集静脉血样,用聚合酶链反应(PCR)进行分子检测。使用 MEGA 7 软件进行系统发生分析。

结果

针对 18S rRNA 基因,研究牛中有 7.24%呈阳性。就年龄而言,7 岁以上牛的阳性率、优势比(OR)和相对风险(RR)明显高于其他年龄组:1 岁以下、1-3 岁和 3-7 岁。关于性别,雌性(7.48%)和雄性(5.56%)的阳性率没有显著差异;然而,OR 和 RR 值表明,雌性(1.376 和 1.345)比雄性(0.727 和 0.743)感染绵羊泰勒虫的风险更高。对当地 5 株分离株的系统发育树分析表明,它们与法国株/分离株的总遗传同源性在 99.64%至 99.98%之间。

结论

据我们所知,本研究是首次使用 PCR 检测方法在伊拉克对牛中绵羊泰勒虫的流行率进行分子鉴定,并在 NCBI-BLAST 中确认了当地分离株的系统发育。因此,关于国内和野生动物中的流行率、遗传多样性以及节肢动物媒介的更多信息对于制定预防和控制绵羊泰勒虫感染的策略至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5951/11563601/5e754c1892a7/OpenVetJ-14-2361-g001.jpg

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