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使用按需滴液带驱动系统的时间分辨 X 射线系列晶体学和互补 X 射线发射光谱学中的样本高效方法。

Sample efficient approaches in time-resolved X-ray serial crystallography and complementary X-ray emission spectroscopy using drop-on-demand tape-drive systems.

机构信息

Diamond Light Source, Harwell Science & Innovation Campus, Didcot, United Kingdom; Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot, United Kingdom.

Diamond Light Source, Harwell Science & Innovation Campus, Didcot, United Kingdom; University Medical Center Hamburg-Eppendorf (UKE), Hamburg, Germany.

出版信息

Methods Enzymol. 2024;709:57-103. doi: 10.1016/bs.mie.2024.10.008. Epub 2024 Oct 23.

Abstract

Dynamic structural biology enables studying biological events at the atomic scale from 10's of femtoseconds to a few seconds duration. With the advent of X-ray Free Electron Lasers (XFELs) and 4th generation synchrotrons, serial crystallography is becoming a major player for time-resolved experiments in structural biology. Despite significant progress, challenges such as obtaining sufficient amounts of protein to produce homogeneous microcrystal slurry, remain. Given this, it has been paramount to develop instrumentation that reduces the amount of microcrystal slurry required for experiments. Tape-drive systems use a conveyor belt made of X-ray transparent material as a motorized solid-support to steer deposited microcrystals into the beam. For efficient sample consumption on-demand ejectors can be synchronized with the X-ray pulses to expose crystals contained in droplets deposited on the tape. Reactions in the crystals can be triggered via various strategies, including pump-probe, substrate/ligand mixing, or gas incubation in the space between droplet ejection and X-ray illumination. Another challenge in time-resolved serial crystallography is interpreting the resulting electron density maps. This is especially difficult for metalloproteins where the active site metal is intimately involved in catalysis and often proceeds through multiple oxidation states during enzymatic catalysis. The unrestricted space around tape-drive systems can be used to accommodate complementary spectroscopic equipment. Here, we highlight tape-drive sample delivery systems for complementary and simultaneous X-ray diffraction (XRD) and X-ray emission spectroscopy (XES) measurements. We describe how the combination of both XRD and XES is a powerful tool for time-resolved experiments at XFELs and synchrotrons.

摘要

动态结构生物学使我们能够在 10 飞秒到几秒钟的时间范围内,从原子尺度研究生物事件。随着 X 射线自由电子激光(XFEL)和第四代同步加速器的出现,连续结晶学成为结构生物学中时间分辨实验的主要手段。尽管取得了重大进展,但仍存在一些挑战,例如获得足够数量的蛋白质以产生同质微晶浆。考虑到这一点,开发能够减少实验所需微晶体浆数量的仪器至关重要。磁带驱动系统使用由 X 射线透明材料制成的传送带作为电动固体支撑,将沉积的微晶体引导到光束中。为了高效地按需消耗样品,可以将喷射器与 X 射线脉冲同步,以暴露沉积在磁带上的液滴中包含的晶体。可以通过各种策略触发晶体中的反应,包括泵探针、底物/配体混合或在液滴喷射和 X 射线照射之间的空间中进行气体孵育。时间分辨连续结晶学的另一个挑战是解释所得电子密度图。对于金属蛋白酶来说,这尤其困难,因为活性部位的金属在催化中密切相关,并且在酶催化过程中通常会经历多个氧化态。磁带驱动系统周围不受限制的空间可用于容纳互补的光谱设备。在这里,我们重点介绍用于互补和同时 X 射线衍射(XRD)和 X 射线发射光谱(XES)测量的磁带驱动样品输送系统。我们描述了如何将 XRD 和 XES 结合起来,成为 XFEL 和同步加速器上时间分辨实验的强大工具。

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