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使用统一医学语言系统(UMLS)和自然语言处理(NLP)在社交媒体上关注糖尿病的健康消费者的日常词汇中识别医学概念和语义类型。

Identifying Medical Concepts and Semantic Types in Lay Vocabularies of Health Consumers Who are Concerned with Diabetes on Social Media Using the UMLS and NLP.

作者信息

Anik Adib Ahmed, Upama Paramita Basak, Rabbani Masud, Tian Shiyu, Park Min Sook, Ahamed Sheikh Iqbal, Luo Jake, Oh Hyunkyoung

机构信息

Ubicomp Lab, Department of Computer Science, Marquette University, Milwaukee, WI, USA.

School of Information, College of Communication and Information, Florida State University, FL, USA.

出版信息

Proc COMPSAC. 2024 Jul;2024:862-869. doi: 10.1109/compsac61105.2024.00119. Epub 2024 Aug 26.

DOI:10.1109/compsac61105.2024.00119
PMID:39640180
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11619756/
Abstract

This study suggests a way to utilize the existing medical ontology and natural language processing techniques to extract major medical concepts from lay vocabularies of health consumers on social media and group them based on the defined semantic types in the ontology. Diabetes-related discussions on Tumblr was used to test the efficiency of SpaCy and the Markov-Viterbi algorithm to map lay medical terms to the defined medical concepts in the UMLS. The system discussed in this paper can better analyze free texts, take care of word ambiguity and extract the lifestyle indicators from the daily life discussions of diabetic people on Tumblr. The findings of this study can contribute to developing health applications that track the health behavior of those living with chronic conditions such as diabetes. This approach can also assist researchers who are interested in processing lay languages used by health consumers to foster an understanding of their health behavior.

摘要

本研究提出了一种利用现有医学本体和自然语言处理技术从社交媒体上健康消费者的日常词汇中提取主要医学概念,并根据本体中定义的语义类型对其进行分组的方法。以Tumblr上与糖尿病相关的讨论为例,测试了SpaCy和马尔可夫-维特比算法将日常医学术语映射到统一医学语言系统(UMLS)中定义的医学概念的效率。本文所讨论的系统能够更好地分析自由文本,处理词义模糊问题,并从Tumblr上糖尿病患者的日常生活讨论中提取生活方式指标。本研究结果有助于开发健康应用程序,以跟踪糖尿病等慢性病患者的健康行为。这种方法还可以帮助有兴趣处理健康消费者使用的日常语言的研究人员,加深对他们健康行为的理解。

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本文引用的文献

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A Survey of Conversational Agents and Their Applications for Self-Management of Chronic Conditions.对话代理及其在慢性病自我管理中的应用调查
Proc COMPSAC. 2023 Jun;2023:1064-1075. doi: 10.1109/COMPSAC57700.2023.00162. Epub 2023 Aug 2.
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Digital Transformation in Healthcare: Technology Acceptance and Its Applications.医疗保健领域的数字化转型:技术接受及其应用。
Int J Environ Res Public Health. 2023 Feb 15;20(4):3407. doi: 10.3390/ijerph20043407.
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Natural Language Processing: from Bedside to Everywhere.自然语言处理:从床边到无处不在。
Yearb Med Inform. 2022 Aug;31(1):243-253. doi: 10.1055/s-0042-1742510. Epub 2022 Jun 2.
4
Improving medical term embeddings using UMLS Metathesaurus.利用 UMLS 语义学术语表改进医学术语嵌入。
BMC Med Inform Decis Mak. 2022 Apr 29;22(1):114. doi: 10.1186/s12911-022-01850-5.
5
Language Translation Apps in Health Care Settings: Expert Opinion.医疗环境中的语言翻译应用:专家观点。
JMIR Mhealth Uhealth. 2019 Apr 9;7(4):e11316. doi: 10.2196/11316.
6
Validating UMLS Semantic Type Assignments Using SNOMED CT Semantic Tags.使用SNOMED CT语义标签验证统一医学语言系统(UMLS)语义类型分配
Methods Inf Med. 2018 Feb;57(1):43-53. doi: 10.3414/ME17-01-0120. Epub 2018 Apr 5.
7
Consumers' Use of UMLS Concepts on Social Media: Diabetes-Related Textual Data Analysis in Blog and Social Q&A Sites.消费者在社交媒体上对统一医学语言系统(UMLS)概念的使用:博客和社交问答网站中与糖尿病相关的文本数据分析
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8
Challenges in Diabetes Care: Can Digital Health Help Address Them?糖尿病护理中的挑战:数字健康能否助力应对?
Clin Diabetes. 2016 Jul;34(3):133-41. doi: 10.2337/diaclin.34.3.133.
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A long journey to short abbreviations: developing an open-source framework for clinical abbreviation recognition and disambiguation (CARD).从冗长表述到简短缩写的漫长历程:开发一个用于临床缩写识别与消歧的开源框架(CARD)
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