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超越传统筛选:揭示极端环境中放线菌的抗生素潜力。

Beyond traditional screening: Unveiling antibiotic potentials of actinomycetes in extreme environments.

作者信息

Trenozhnikova Lyudmila P, Baimakhanova Gul B, Baimakhanova Baiken B, Balgimbayeva Assya S, Daugaliyeva Saule T, Faizulina Elmira R, Tatarkina Larisa G, Spankulova Gulzhan A, Berillo Dmitriy A, Beutler John A

机构信息

LLP Research and Production Center for Microbiology and Virology, Almaty, Republic of Kazakhstan, Kazakhstan.

Department of Chemistry and Biochemical Engineering, Satbayev University, Almaty, Republic of Kazakhstan, Kazakhstan.

出版信息

Heliyon. 2024 Nov 13;10(22):e40371. doi: 10.1016/j.heliyon.2024.e40371. eCollection 2024 Nov 30.

Abstract

Extreme ecosystems are a rich source of specialized metabolites that can overcome multidrug resistance. However, the low efficiency of traditional exploratory research in discovering new antibiotics remains a major limitation. We hypothesized that actinomycetes may have the ability to produce antibiotics in the extremes of a changing natural environment. This study introduces a novel approach to screening natural antibiotic producers from extreme habitats based on the relationship between organisms' adaptive traits and their metabolic activities. The antibacterial and antifungal properties of 667 actinomycete isolates, obtained from 160 samples of Kazakhstan's diverse extreme habitats, were studied under neutral, saline, and alkaline conditions against MRSA, , and . Among these isolates, 113 exhibited antibacterial properties, and 109 demonstrated antifungal properties. Notably, one-fifth of the antagonist isolates could produce active substances solely under extreme growth conditions. Fifty-three antagonistic actinomycetes, possessing these characteristics, have been categorized into groups and warrant further investigation as potential producers of new natural antibiotics. Molecular genetic analysis of the selected isolates revealed a high prevalence of and strains. Furthermore, 83.4 % of obtained isolates demonstrated the ability to thrive in all studied habitats-neutral, saline, and alkaline. 96.3 % of actinomycetes isolated from extreme environments exhibited adaptation to neutral conditions, highlighting their inherent versatility. Our findings underscore the nearly complete potential (99.7 %) of isolates to overcome the salinity barrier of 3.5 % NaCl, indicating their capacity to inhabit oceanic environments. We assert that actinomycetes should be perceived as a cohesive, globally adaptive group, capable of migrating between changing conditions or remaining stable within them. These studies lay the groundwork for the development of a new platform for screening natural antibiotics.

摘要

极端生态系统是能克服多重耐药性的特殊代谢产物的丰富来源。然而,传统探索性研究在发现新抗生素方面效率低下仍然是一个主要限制因素。我们推测放线菌可能有能力在不断变化的自然极端环境中产生抗生素。本研究引入了一种基于生物体适应性状与其代谢活动之间关系,从极端栖息地筛选天然抗生素产生菌的新方法。对从哈萨克斯坦多样极端栖息地的160个样本中获得的667株放线菌分离株,在中性、盐性和碱性条件下针对耐甲氧西林金黄色葡萄球菌、[此处原文缺失具体菌株名称]和[此处原文缺失具体菌株名称]的抗菌和抗真菌特性进行了研究。在这些分离株中,113株表现出抗菌特性,109株表现出抗真菌特性。值得注意的是,五分之一的拮抗分离株仅在极端生长条件下能产生活性物质。具有这些特征的53株拮抗放线菌已被分类,作为新天然抗生素的潜在产生菌值得进一步研究。对所选分离株的分子遗传学分析显示[此处原文缺失具体基因或菌株相关信息]和[此处原文缺失具体基因或菌株相关信息]菌株的高流行率。此外,83.4%的获得分离株显示出在所有研究栖息地——中性、盐性和碱性环境中生长的能力。从极端环境中分离出的放线菌中有96.3%表现出对中性条件的适应性,突出了它们固有的多功能性。我们的研究结果强调了分离株几乎完全有潜力(99.7%)克服3.5%氯化钠的盐度障碍,表明它们有能力栖息在海洋环境中。我们断言,放线菌应被视为一个有凝聚力、全球适应性的群体,能够在不断变化的条件之间迁移或在其中保持稳定。这些研究为开发一种筛选天然抗生素的新平台奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9de/11617725/495a0653b8cd/gr1.jpg

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