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探索产色素链霉菌作为合成色素的替代来源:多样性、生物合成及生物技术应用。综述

Exploring pigment-producing Streptomyces as an alternative source to synthetic pigments: diversity, biosynthesis, and biotechnological applications. A review.

作者信息

Asah-Asante Richard, Tang Lushi, Gong Xiaowei, Fan Shiqi, Yan Chenjun, Asante Joseph Obiri, Zeng Qingwei

机构信息

School of Life Science and Food Engineering, Huaiyin Institute of Technology, Huaian, 223003, China.

School of Pharmacy, Jiangsu Food and Pharmaceutical Science College, Huaian, 223003, China.

出版信息

World J Microbiol Biotechnol. 2025 Jun 25;41(7):211. doi: 10.1007/s11274-025-04379-7.

DOI:10.1007/s11274-025-04379-7
PMID:40555885
Abstract

The increasing health and environmental concerns associated with synthetic pigments have intensified the global search for natural, eco-friendly alternatives. Among microbial sources, Streptomyces, a genus within the class Actinomycetia, has emerged as a prolific source of bioactive pigments with wide-ranging industrial applications. The review provides a comprehensive synthesis of pigment-producing Streptomyces, focusing on their ecological diversity, biosynthetic pathways, and taxonomic relevance. This review has discussed key pigment classes, including melanin, prodiginine, quinone, and actinorhodin, with their bioactive properties, such as antioxidants, antimicrobials, and anticancer. The review further emphasizes recent advancements in synthetic biology, including clustered regularly interspaced short palindromic repeats/CRISPR-associated (CRISPR/Cas)-based gene editing, which has facilitated the activation of silent biosynthetic gene clusters (BGCs) that can enhance pigment yield. Additionally, this review discusses the optimization and fermentation protocols, industrial scalability, and the application of pigments in food, pharmaceutical, cosmetic, textile, and environmental sectors. Despite these advancements, critical research gaps persist, particularly in toxicological evaluation, pigment stability under industrial conditions, high-throughput screening of unexplored Streptomyces strains, and the integration of AI-based predictive tools for pathway optimization. Addressing these gaps is essential to unlocking the full potential of Streptomyces-derived pigments to replace harmful synthetic colorants.

摘要

与合成色素相关的健康和环境问题日益受到关注,这加剧了全球对天然、环保替代品的探索。在微生物来源中,放线菌纲中的链霉菌属已成为具有广泛工业应用的生物活性色素的丰富来源。这篇综述全面综合了产色素链霉菌,重点关注其生态多样性、生物合成途径和分类学相关性。本综述讨论了关键的色素类别,包括黑色素、灵菌红素、醌类和放线紫红素,以及它们的生物活性特性,如抗氧化剂、抗菌剂和抗癌剂。该综述进一步强调了合成生物学的最新进展,包括基于成簇规律间隔短回文重复序列/CRISPR相关蛋白(CRISPR/Cas)的基因编辑,这有助于激活可提高色素产量的沉默生物合成基因簇(BGCs)。此外,本综述讨论了优化和发酵方案、工业可扩展性以及色素在食品、制药、化妆品、纺织和环境领域的应用。尽管取得了这些进展,但关键的研究差距仍然存在,特别是在毒理学评估、工业条件下的色素稳定性、未探索链霉菌菌株的高通量筛选以及基于人工智能的途径优化预测工具的整合方面。解决这些差距对于释放链霉菌衍生色素替代有害合成色素的全部潜力至关重要。

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本文引用的文献

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Diversity of secondary metabolites from marine Streptomyces with potential anti-tubercular activity: a review.具有潜在抗结核活性的海洋链霉菌次级代谢产物的多样性:综述
Arch Microbiol. 2025 Feb 17;207(3):64. doi: 10.1007/s00203-024-04233-8.
2
Free radicals and their impact on health and antioxidant defenses: a review.自由基及其对健康和抗氧化防御的影响:综述
Cell Death Discov. 2025 Jan 24;11(1):19. doi: 10.1038/s41420-024-02278-8.
3
Actinomycete-Derived Pigments: A Path Toward Sustainable Industrial Colorants.放线菌衍生色素:通往可持续工业色素的途径。
Mar Drugs. 2025 Jan 13;23(1):39. doi: 10.3390/md23010039.
4
Current Approaches for Genetic Manipulation of spp.-Key Bacteria for Biotechnology and Environment.用于生物技术和环境的关键细菌物种基因操作的当前方法。
BioTech (Basel). 2025 Jan 2;14(1):3. doi: 10.3390/biotech14010003.
5
Natural pigments: innovative extraction technologies and their potential application in health and food industries.天然色素:创新提取技术及其在健康和食品工业中的潜在应用。
Front Pharmacol. 2025 Jan 8;15:1507108. doi: 10.3389/fphar.2024.1507108. eCollection 2024.
6
Engineered CRISPR-Cas9 for Streptomyces sp. genome editing to improve specialized metabolite production.用于链霉菌属基因组编辑以提高特殊代谢产物产量的工程化CRISPR-Cas9
Nat Commun. 2025 Jan 21;16(1):874. doi: 10.1038/s41467-025-56278-y.
7
Harnessing the Streptomyces-originating type I-E CRISPR/Cas system for efficient genome editing in Streptomyces.利用源自链霉菌的I-E型CRISPR/Cas系统在链霉菌中进行高效基因组编辑。
Sci China Life Sci. 2025 Apr;68(4):1174-1182. doi: 10.1007/s11427-024-2677-4. Epub 2025 Jan 14.
8
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Environ Microbiome. 2024 Nov 9;19(1):88. doi: 10.1186/s40793-024-00634-w.