Bonthrone Alexandra F, Blesa Cábez Manuel, Edwards A David, Hajnal Jo V, Counsell Serena J, Boardman James P
Centre for the Developing Brain, Research Department of Early Life Imaging, School of Biomedical Engineering and Imaging Sciences, King's College London, UK.
Centre for Reproductive Health, Institute for Regeneration and Repair, University of Edinburgh, UK; Centre for Clinical Brain Sciences, University of Edinburgh, UK.
Dev Cogn Neurosci. 2025 Jan;71:101488. doi: 10.1016/j.dcn.2024.101488. Epub 2024 Dec 8.
Large diffusion-weighted brain MRI (dMRI) studies in neonates are crucial for developmental neuroscience. Our aim was to investigate the utility of ComBat, an empirical Bayes tool for multisite harmonization, in removing site effects from white matter (WM) dMRI measures in healthy infants born at 37 gestational weeks+ 0 days-42 weeks+ 6 days from the Theirworld Edinburgh Birth Cohort (n = 86) and Developing Human Connectome Project (n = 287). Skeletonized fractional anisotropy (FA), mean, axial and radial diffusivity (MD, AD, RD) maps were harmonized. Differences between voxel-wise metrics, skeleton means and histogram widths (5th-95th percentile) were assessed before and after harmonization, as well as variance associated with gestational age at birth and scan. Before harmonization, large cohort differences were observed. Harmonization removed all voxel-wise differences from MD maps and all metric means and histogram widths, however small voxel-wise differences (<1.5 % of voxels) remained in FA, AD and RD. We detected significant relationships between GA at birth and all metrics. When comparing single site and multisite harmonized datasets of equal sample sizes, harmonized data resulted in smaller standardized regression coefficients. ComBat could enable unprecedented sample sizes in developmental neuroscience, offering new horizons for biomarker discovery and validation, understanding typical and atypical brain development, and assessing neuroprotective therapies.
对新生儿进行大规模扩散加权脑磁共振成像(dMRI)研究对发育神经科学至关重要。我们的目的是研究经验贝叶斯多站点归一化工具ComBat在消除来自Theirworld爱丁堡出生队列(n = 86)和人类连接组发育项目(n = 287)中孕37周+0天至42周+6天出生的健康婴儿白质(WM)dMRI测量中的站点效应方面的效用。对骨架化分数各向异性(FA)、平均、轴向和径向扩散率(MD、AD、RD)图谱进行了归一化处理。在归一化前后评估了逐体素指标、骨架均值和直方图宽度(第5百分位数至第95百分位数)之间的差异,以及与出生时胎龄和扫描相关的方差。在归一化之前,观察到了较大的队列差异。归一化消除了MD图谱中所有逐体素差异以及所有指标均值和直方图宽度,但FA、AD和RD中仍存在较小的逐体素差异(<1.5%的体素)。我们检测到出生时的胎龄与所有指标之间存在显著关系。当比较等样本量的单站点和多站点归一化数据集时,归一化后的数据导致较小的标准化回归系数。ComBat可以在发育神经科学中实现前所未有的样本量,为生物标志物的发现和验证、理解典型和非典型脑发育以及评估神经保护疗法提供新的前景。