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通过随机模拟研究荷兰肉鸡生产金字塔中新兴产碳青霉烯酶肠杆菌科细菌的传播情况。

Investigating a propagation of emerging carbapenemase-producing Enterobacteriaceae in Dutch broiler production pyramid through stochastic simulation.

作者信息

Dankittipong N, Stegeman J A, de Vos C J, Wagenaar J A, Fischer E A J

机构信息

Faculty of Veterinary Medicine, Utrecht University, Yalelaan 7, Utrecht, the Netherlands.

Wageningen Bioveterinary Research, Wageningen University & Research, Houtribweg 39, Lelystad, the Netherlands.

出版信息

One Health. 2024 Nov 26;19:100945. doi: 10.1016/j.onehlt.2024.100945. eCollection 2024 Dec.

DOI:10.1016/j.onehlt.2024.100945
PMID:39670196
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11635706/
Abstract

Simulating resistant bacteria transmission in livestock informs surveillance strategies for emerging threats like Carbapenem-resistant Enterobacteriaceae (CPE), aiding targeted surveillance and detecting CPE through active methods. We employed a simulation model to assess three potential scenarios for introducing CPE: 1) a single import of live animals, 2) the use of contaminated feed, and 3) multiple imports of live animals. Employing the SimInf package, we constructed a population model for broiler production, encompassing rearing farms, multiplier farms, hatcheries, and broiler farms. Subsequently, we introduced CPE and allowed it to spread throughout the population using the Susceptible-Colonized (Infectious)-Susceptible model. The model ran for 10 years with 100 runs. In the single import scenario, 1-2 rearing and multiplier farms saw major outbreaks in all 100 runs, while the broiler farm experienced major outbreaks in only 10 out of 100 runs; in the feed scenario, major outbreaks occurred in rearing farms in 32 runs and in multiplier farms in 26 runs, with major outbreaks in broiler farms observed in all 100 runs; in the multiple import scenario, outbreaks in rearing and multiplier farms happened in all 100 runs, with these major outbreaks reaching the broiler farm in 91 out of 100 runs. CPE transmission from imported or colonized broilers is rapid but short-lived within the broiler population, contrasting with the sporadic and prolonged emergence of CPE from contaminated feed, resulting in lower cumulative probabilities of detection from imported or colonized animals (0-0.50) compared to contaminated feed (0.9-0.97) over a 10-year period. Sensitivity analysis indicated that key outcomes such as farm outbreaks, chicken colonization, and outbreak duration are highly correlated with age-associated reductions in transmission (ψ).

摘要

模拟家畜中耐药细菌的传播为应对碳青霉烯类耐药肠杆菌科细菌(CPE)等新出现威胁的监测策略提供了信息,有助于进行针对性监测并通过主动方法检测CPE。我们采用了一个模拟模型来评估引入CPE的三种潜在情景:1)单次进口活体动物,2)使用受污染饲料,3)多次进口活体动物。利用SimInf软件包,我们构建了一个肉鸡生产的种群模型,涵盖育雏场、扩繁场、孵化场和肉鸡场。随后,我们引入CPE并使用易感-定植(感染)-易感模型使其在种群中传播。该模型运行10年,共运行100次。在单次进口情景中,所有100次运行中有1-2个育雏场和扩繁场出现了重大疫情,而肉鸡场在100次运行中仅有10次出现重大疫情;在饲料情景中,育雏场有32次运行出现重大疫情,扩繁场有26次运行出现重大疫情,肉鸡场在所有100次运行中均出现重大疫情;在多次进口情景中,所有育雏场和扩繁场在100次运行中均出现疫情,其中91次运行中这些重大疫情蔓延到了肉鸡场。进口或定植肉鸡中的CPE传播迅速,但在肉鸡种群中持续时间较短,这与受污染饲料中CPE的零星且持续出现形成对比,导致在10年期间,与受污染饲料(0.9-0.97)相比,从进口或定植动物中检测到CPE的累积概率较低(0-0.50)。敏感性分析表明,农场疫情、鸡群定植和疫情持续时间等关键结果与传播中与年龄相关的减少(ψ)高度相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/499518985d14/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/73c6b1532203/gr1.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/d28797f4f37a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/e446f4d10fce/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/9a5c6fdf1acf/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/ffb27739497d/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/499518985d14/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/73c6b1532203/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/25a4eb3beda6/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/d28797f4f37a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/e446f4d10fce/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/9a5c6fdf1acf/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/ffb27739497d/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e23/11635706/499518985d14/gr7.jpg

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