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基于基因组信息指导的OSMAC研究促使从深海来源的青霉属真菌Penicillium sp. SCSIO sof101中发现了另外五种次生代谢产物。

OSMAC Investigation Directed by Genome Information Led to the Discovery of Additional Five Types of Secondary Metabolites From Deep-Sea Derived Penicillium Sp. SCSIO sof101.

作者信息

Wang Songtao, Chen Ting, Yang Jiafan, Song Yongxiang, Yan Yan

机构信息

CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, RNAM Center for Marine Microbiology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China.

College of Marine Sciences, University of Chinese Academy of Sciences, Beijing, China.

出版信息

Chem Biodivers. 2025 Apr;22(4):e202402685. doi: 10.1002/cbdv.202402685. Epub 2024 Dec 14.

DOI:10.1002/cbdv.202402685
PMID:39673484
Abstract

Marine fungi are considered important resources for new lead compounds in One Strain Many Compounds (OSMAC) strategy. In particular, deep-sea derived fungi have been deemed potent for novel bioactive structures due to their extreme living environment and evolution of special biosynthetic gene clusters (BGCs) for secondary metabolites. Chemical investigations of the deep-sea derived Penicillium sp. SCSIO sof101 led to the discovery of 5 types of 21 bioactive compounds, including the significant anti-Gram-negative bacterial compound sulfoxanthicillin. Bioinformatics analysis of the strain revealed 56 BGCs for the secondary metabolites. This information guided the further culture optimization, which led to the discovery of another five types of secondary metabolites (1-11), including one non-ribosomal peptide and polyketide (NRP-PK) type compounds (1-3), which included a new compound (1), one NRP type compounds (4-5), and three PK types compounds (6-11). The structure of compound 1 was elucidated by spectral analyses including HR-ESI-MS, 1D and 2D NMR, and chemical derivatization approaches. Compound 1 was inactive in the evaluation of antibacterial activity and cytotoxicity. Its biosynthetic pathway was proposed. This finding paves the way for further mining of OSMAC potent from the deep-sea derived strain.

摘要

海洋真菌被认为是“一株多化合物”(OSMAC)策略中新型先导化合物的重要资源。特别是,深海来源的真菌由于其极端的生存环境以及用于次生代谢产物的特殊生物合成基因簇(BGCs)的进化,被认为具有产生新型生物活性结构的潜力。对深海来源的青霉属菌株SCSIO sof101进行化学研究,发现了5种类型的21种生物活性化合物,包括具有显著抗革兰氏阴性菌活性的化合物磺胺黄青霉素。对该菌株的生物信息学分析揭示了56个次生代谢产物的BGCs。这些信息指导了进一步的培养优化,从而发现了另外五种类型的次生代谢产物(1-11),包括一种非核糖体肽和聚酮化合物(NRP-PK)类型的化合物(1-3),其中包括一种新化合物(1)、一种NRP类型的化合物(4-5)以及三种PK类型的化合物(6-11)。通过包括高分辨电喷雾电离质谱(HR-ESI-MS)、一维和二维核磁共振(1D和2D NMR)以及化学衍生化方法在内的光谱分析阐明了化合物1的结构。化合物1在抗菌活性和细胞毒性评估中无活性。提出了其生物合成途径。这一发现为进一步从深海来源菌株中挖掘OSMAC活性物质铺平了道路。

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