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Single-cell technologies: current and near future.

作者信息

Wang Chenfei, Liu Qi, Fan Xiaohui, Shi Tieliu

机构信息

Key Laboratory of Spine and Spinal Cord Injury Repair and Regeneration, Ministry of Education, Orthopedics Department, Tongji Hospital, Bioinformatics Department, School of Life Sciences and Technology, Tongji University, Shanghai, 200082, China.

Frontier Science Center for Stem Cells, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China.

出版信息

Sci China Life Sci. 2025 Jan;68(1):1-4. doi: 10.1007/s11427-024-2813-y. Epub 2024 Dec 12.

DOI:10.1007/s11427-024-2813-y
PMID:39673679
Abstract
摘要

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Cancer Cell. 2024 Oct 14;42(10):1764-1783.e10. doi: 10.1016/j.ccell.2024.08.020. Epub 2024 Sep 19.
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Single-cell and spatial multiomic inference of gene regulatory networks using SCRIPro.使用SCRIPro进行基因调控网络的单细胞和空间多组学推断
Bioinformatics. 2024 Jul 18;40(7). doi: 10.1093/bioinformatics/btae466.
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An immune cell map of human lung adenocarcinoma development reveals an anti-tumoral role of the Tfh-dependent tertiary lymphoid structure.
人类肺腺癌发展的免疫细胞图谱揭示了 Tfh 依赖性三级淋巴结构的抗肿瘤作用。
Cell Rep Med. 2024 Mar 19;5(3):101448. doi: 10.1016/j.xcrm.2024.101448. Epub 2024 Mar 8.
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Predicting transcriptional outcomes of novel multigene perturbations with GEARS.用 GEARS 预测新型多基因扰动的转录结果。
Nat Biotechnol. 2024 Jun;42(6):927-935. doi: 10.1038/s41587-023-01905-6. Epub 2023 Aug 17.
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SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks.SCENIC+：单细胞多组学推断增强子和基因调控网络。
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Brief Bioinform. 2023 May 19;24(3). doi: 10.1093/bib/bbad123.
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Spatial profiling of chromatin accessibility in mouse and human tissues.在小鼠和人体组织中进行染色质可及性的空间分析。
Nature. 2022 Sep;609(7926):375-383. doi: 10.1038/s41586-022-05094-1. Epub 2022 Aug 17.
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