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抗疟萜类异腈生物合成悖论的解释。提出氰甲酸酯作为NC传递载体。

The Paradox of Antimalarial Terpenoid Isonitrile Biosynthesis Explained. Proposal of Cyanoformate as an NC Delivery Vector.

作者信息

Molinski Tadeusz F

机构信息

Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093-0358, United States.

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, California 92093-0358, United States.

出版信息

J Nat Prod. 2025 Jan 24;88(1):205-210. doi: 10.1021/acs.jnatprod.4c01295. Epub 2024 Dec 20.

Abstract

Marine sponge diterpenoid isonitriles are exceptional nitrogenous natural products that exhibit antiplasmodial activity. Their biosynthesis presents a biosynthetic puzzle: how do the elements of NC engage terpenyl carbocations in isoprenoid secondary metabolism, and what is the biosynthetic precursor of the NC group? Cyanoformic acid (NC-COOH, ) is proposed as a plausible delivery vehicle of NC that resolves a paradox in the commonly held proposition that an inorganic cyanide anion, CN, terminates terpenoid isonitrile (TI) biosynthesis. DFT calculations of NC-COOH and its conjugate base, cyanoformate, NC-COO (), support high nucleophilicity at N and explain bond-forming constitutionality: attack at N and formation of an isonitrile over its nitrile isomer. TI biogenesis is compared to the cyanoformamide-containing ceratamines that arise from oxidation of a terminal -Gly amide precursor. A unifying model links C-NC vs C-CN bond formation and places Gly at the center of both biosynthetic schemes.

摘要

海洋海绵二萜异腈是一类具有抗疟活性的特殊含氮天然产物。它们的生物合成存在一个谜题:在类异戊二烯次级代谢中,NC基团的元素是如何与萜基碳正离子结合的,以及NC基团的生物合成前体是什么?氰基甲酸(NC-COOH)被认为是一种合理的NC传递载体,它解决了一个普遍观点中的矛盾,即无机氰化物阴离子CN会终止萜类异腈(TI)的生物合成。对NC-COOH及其共轭碱氰基甲酸酯(NC-COO)的密度泛函理论计算支持了N处的高亲核性,并解释了成键的合理性:在N处进攻并形成异腈而非其腈异构体。将TI生物合成与由末端-Gly酰胺前体氧化产生的含氰基甲酰胺的角胺进行了比较。一个统一的模型将C-NC与C-CN键的形成联系起来,并将Gly置于两种生物合成途径的中心。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c31b/11773565/4483794fc2be/np4c01295_0002.jpg

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