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从日本传统自制泡菜中分离出的MH-1菌株的全基因组序列

Complete genome sequence of strain MH-1 isolated from Japanese traditional homemade pickled Chinese cabbage.

作者信息

Hashimoto Mina, Tanimoto Yoshihiko, Chen Yen Lin, Wada Takayuki, Kage-Nakadai Eriko

机构信息

Graduate School of Human Life and Ecology, Osaka Metropolitan University, Osaka, Japan.

Institute for Life and Medical Sciences, Kyoto University, Kyoto, Japan.

出版信息

Microbiol Resour Announc. 2025 Feb 11;14(2):e0106424. doi: 10.1128/mra.01064-24. Epub 2024 Dec 20.

DOI:10.1128/mra.01064-24
PMID:39705509
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11812383/
Abstract

was recently reported as a novel species. Here, we present the whole-genome sequence of strain MH-1 isolated from homemade pickled Chinese cabbage in Japan. These genomic data have the potential to help clarify the role of species in fermented foods.

摘要

最近被报道为一个新物种。在此，我们展示了从日本自制泡菜中分离出的菌株MH-1的全基因组序列。这些基因组数据有可能有助于阐明该物种在发酵食品中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bbe/11812383/1d7d3eb2ccc9/mra.01064-24.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bbe/11812383/1d7d3eb2ccc9/mra.01064-24.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bbe/11812383/1d7d3eb2ccc9/mra.01064-24.f001.jpg

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本文引用的文献

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IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.
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Mol Biol Evol. 2020 May 1;37(5):1530-1534. doi: 10.1093/molbev/msaa015.
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sp. nov., sp. nov., sp. nov., sp. nov., sp. nov., sp. nov. and sp. nov., isolated from traditional Chinese pickle.sp. nov., sp. nov., sp. nov., sp. nov., sp. nov., sp. nov. 和 sp. nov.，均从传统中国泡菜中分离得到。
Int J Syst Evol Microbiol. 2019 Oct;69(10):3237-3247. doi: 10.1099/ijsem.0.003619.
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Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
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