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揭开染色体外环状DNA的奥秘:从产生到在人类癌症与健康中的临床相关性

Unveiling the mysteries of extrachromosomal circular DNA: from generation to clinical relevance in human cancers and health.

作者信息

Wang Zilong, Yu Jiaying, Zhu Wenli, Hong Xiaoning, Xu Zhen, Mao Shuang, Huang Lei, Han Peng, He Chunxiao, Song Changze, Xiang Xi

机构信息

Scientific Research Center, The Seventh Affiliated Hospital, Sun Yat-Sen University, Shenzhen, 518107, China.

Department of Andrology, The Seventh Affiliated Hospital, Sun Yat-Sen University, Shenzhen, 518107, China.

出版信息

Mol Cancer. 2024 Dec 20;23(1):276. doi: 10.1186/s12943-024-02187-5.

DOI:10.1186/s12943-024-02187-5
PMID:39707444
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11660679/
Abstract

Extrachromosomal circular DNAs (eccDNAs) are a type of circular DNAs originating from but independent of chromosomal DNAs. Nowadays, with the rapid development of sequencing and bioinformatics, the accuracy of eccDNAs detection has significantly improved. This advancement has consequently enhanced the feasibility of exploring the biological characteristics and functions of eccDNAs. This review elucidates the potential mechanisms of eccDNA generation, the existing methods for their detection and analysis, and their basic features. Furthermore, it focuses on the biological functions of eccDNAs in regulating gene expression under both physiological and pathological conditions. Additionally, the review summarizes the clinical implications of eccDNAs in human cancers and health.

摘要

染色体外环状DNA(eccDNA)是一类起源于染色体DNA但独立于染色体DNA的环状DNA。如今,随着测序技术和生物信息学的快速发展,eccDNA检测的准确性有了显著提高。这一进展相应地提高了探索eccDNA生物学特性和功能的可行性。本文综述阐述了eccDNA产生的潜在机制、现有的检测和分析方法及其基本特征。此外,还重点讨论了eccDNA在生理和病理条件下调节基因表达的生物学功能。此外,本文综述总结了eccDNA在人类癌症和健康方面的临床意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32a7/11660679/475dba4a58f9/12943_2024_2187_Fig7_HTML.jpg
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本文引用的文献

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Genome-wide characterization of extrachromosomal circular DNA in breast cancer and its potential role in carcinogenesis and cancer progression.全基因组范围内鉴定乳腺癌中的染色体外环状 DNA 及其在致癌和癌症进展中的潜在作用。
Cell Rep. 2024 Nov 26;43(11):114845. doi: 10.1016/j.celrep.2024.114845. Epub 2024 Oct 16.
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Characterization and functional analysis of extrachromosomal circular DNA discovered from circulating extracellular vesicles in liver failure.
染色体外环状DNA驱动动态基因组可塑性:在疾病进展中的新作用及临床潜力
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Deciphering the role of reactive oxygen species in idiopathic asthenozoospermia.解读活性氧在特发性弱精子症中的作用。
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LncRNA OLMALINC promotes osteosarcoma progression through USP1-mediated autophagy suppression.长链非编码RNA OLMALINC通过USP1介导的自噬抑制促进骨肉瘤进展。
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