Ikarashi Tomoya, Bandaranayake Uchini S, Watari Takahiro, Yamaguchi Takashi, Hatamoto Masashi
Department of Civil and Environmental Engineering, Nagaoka University of Technology, Niigata, 940-2188, Japan.
Department of Science of Technology Innovation, Nagaoka University of Technology, Niigata, 940-2188, Japan.
Heliyon. 2024 Oct 1;10(19):e38795. doi: 10.1016/j.heliyon.2024.e38795. eCollection 2024 Oct 15.
A novel, gelatinous, colony-forming, rod-shaped bacterial strain, designated IK01 was isolated from biofilms formed on the membrane surface of a sewage-treating membrane bioreactor (MBR). Strain IK01 produced gelatinous and almost transparent colonies at lower medium concentrations. Fourier transform infrared analysis of the gelatinous colony matrix showed that the matrix could be a biofilm substance. This suggests that strain IK01 is a fouling-causing bacteria in the MBR. Furthermore, 16S rRNA gene sequence analysis showed that strain IK01 was phylogenetically placed in the genus The average nucleotide identity values for IK01 and the other 50 species of the genus ranged from 78.5 to 83.9 %. Correspondingly, the estimated digital DNA-DNA hybridization values ranged from 20.8 to 24.4 %. The genomic DNA G + C content was 66.0 %. The predominant fatty acids were summed feature 8 (C 7 and/or C 6), summed feature 3 (C 7 and/or C 6), and C 2-OH. A polar lipid profile revealed phosphatidylethanolamine, two unidentified phospholipids, and three aminoglycophospholipids as major compounds. The major respiratory quinone was ubiquinone Q-10. Genotypic, chemotaxonomic, and phenotypic analyses characterized the newly identified strain IK01, as a novel species of the genus for which we propose the name sp. nov. The type strain is IK01 (NBRC 116408 = DSM 116658).
从污水处理膜生物反应器(MBR)膜表面形成的生物膜中分离出一种新型的、形成凝胶状菌落的杆状细菌菌株,命名为IK01。IK01菌株在较低的培养基浓度下产生凝胶状且几乎透明的菌落。对凝胶状菌落基质的傅里叶变换红外分析表明,该基质可能是一种生物膜物质。这表明IK01菌株是MBR中的一种致污细菌。此外,16S rRNA基因序列分析表明,IK01菌株在系统发育上属于 属。IK01与该属其他50个物种的平均核苷酸同一性值在78.5%至83.9%之间。相应地,估计的数字DNA-DNA杂交值在20.8%至24.4%之间。基因组DNA的G + C含量为66.0%。主要脂肪酸为总和特征8(C 7和/或C 6)、总和特征3(C 7和/或C 6)和C 2-OH。极性脂质谱显示磷脂酰乙醇胺、两种未鉴定的磷脂和三种氨基糖磷脂为主要化合物。主要呼吸醌为泛醌Q-10。基因型、化学分类学和表型分析将新鉴定的IK01菌株鉴定为 属的一个新物种,我们提议将其命名为 sp. nov.。模式菌株为IK01(NBRC 116408 = DSM 116658)。