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金黄色葡萄球菌丝氨酸水解酶FphH和FphI的相似但不同的生化特性

Similar but Distinct-Biochemical Characterization of the  Staphylococcus aureus Serine Hydrolases FphH and FphI.

作者信息

Fellner Matthias, Randall George, Bitac Ianah R C G, Warrender Annmaree K, Sethi Ashish, Jelinek Raz, Kass Itamar

机构信息

Biochemistry Department, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.

Australian Nuclear Science and Technology Organisation (ANSTO), Australian Synchrotron, Clayton, Victoria, Australia.

出版信息

Proteins. 2025 May;93(5):1009-1021. doi: 10.1002/prot.26785. Epub 2024 Dec 26.

DOI:10.1002/prot.26785
PMID:39726198
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11971002/
Abstract

Staphylococcus aureus is a major cause of infections like bacteremia, pneumonia, and endocarditis. These infections are often linked to the ability of S. aureus to form biofilms. Several S. aureus serine hydrolases have previously been identified to be active during biofilm-forming conditions. Here, we present the biochemical characterization of two of these enzymes-fluorophosphonate binding hydrolase H and I (FphH, FphI). Cryogenic and room-temperature X-ray crystallography, enzymatic substrate profiling, small-angle X-ray scattering analysis, and molecular dynamics simulations provide new insights into similarities and differences between these two hydrolase_4 domain family members. We discover that these enzymes share an overall fold, including a flexible lid or cap region above the active site, which can be seen to be mobile in solution. Differences in the active site pocket and lid residues differentiate them and explain speed differences in their carboxyesterase substrate profile toward small unbranched carbon chain ester molecules. The first analysis of FphI is also compared to our previous knowledge of FphH and its association to stress conditions. These results enable the future precise targeting of Fph serine hydrolase family members with a long-term goal to significantly improve the health and wellbeing of individuals and populations worldwide.

摘要

金黄色葡萄球菌是菌血症、肺炎和心内膜炎等感染的主要病因。这些感染通常与金黄色葡萄球菌形成生物膜的能力有关。此前已鉴定出几种金黄色葡萄球菌丝氨酸水解酶在生物膜形成条件下具有活性。在此,我们展示了其中两种酶——氟膦酸酯结合水解酶H和I(FphH、FphI)的生化特性。低温和室温X射线晶体学、酶促底物分析、小角X射线散射分析以及分子动力学模拟为这两个水解酶4结构域家族成员之间的异同提供了新的见解。我们发现这些酶具有总体折叠结构,包括活性位点上方的一个灵活的盖子或帽状区域,在溶液中可见其具有流动性。活性位点口袋和盖子残基的差异使它们有所区别,并解释了它们对小的无支链碳链酯分子的羧酸酯酶底物谱的速度差异。对FphI的首次分析还与我们之前对FphH的了解及其与应激条件的关联进行了比较。这些结果有助于未来对Fph丝氨酸水解酶家族成员进行精确靶向,其长期目标是显著改善全世界个人和人群的健康与福祉。