Yin Hai Chang, Jiang Deng Hao, Yu Tian Fei, Jiang Xin Jie, Liu Di
College of Life Science and Agriculture Forestry, Qiqihar University, Qiqihar, China.
Postdoctoral Research Workstation, Heilongjiang Academy of Agricultural Sciences, Harbin, China.
Front Cell Infect Microbiol. 2024 Dec 13;14:1432422. doi: 10.3389/fcimb.2024.1432422. eCollection 2024.
Lactic acid bacteria are widely regarded as safe alternatives to antibiotics in livestock and poultry farming and have probiotic potential. () is a prominent component of pigeon crop microbiota; however, its function is unknown. In this study, a strain of 1003 from pigeon cecum was identified by combining whole genome sequencing and phenotypic analysis, and its safety and probiotic properties were studied. Whole-genome sequencing revealed that the 1003 genome length is 2.58 Mb, its average percent guanine-cytosine is 40.43%, and it encodes 1,757 protein-coding genes. Annotation of clusters of orthologous groups classified predicted proteins from the assembled genome as having cellular, metabolic, and information-related functions. A gene cluster associated with the synthesis of a broad-spectrum antimicrobial compound confirmed by antibacterial spectrum testing was identified using genome mining tools. Based on hemolysis test results, the strain was determined to be safe. This strain exhibited a high survival rate in the presence of bile salts and acidic conditions and a significant self-aggregation propensity and hydrophobicity. animal experiments showed that 1003 exhibits probiotic and antibacterial effects and that the substances exerting antibacterial effects are organic acids. Metabolomics analysis revealed that 1003 supernatant contained seven organic acids, including butyric acid. 1003 showed good safety and probiotic potential in genomics, physiological biochemistry, and animal experiments, and could be considered a suitable candidate for promoting livestock and poultry health.
乳酸菌在畜禽养殖中被广泛认为是抗生素的安全替代品,具有益生菌潜力。()是鸽嗉囊微生物群的一个重要组成部分;然而,其功能尚不清楚。在本研究中,通过全基因组测序和表型分析鉴定了一株来自鸽盲肠的1003菌株,并对其安全性和益生菌特性进行了研究。全基因组测序显示,1003菌株的基因组长度为2.58 Mb,其鸟嘌呤-胞嘧啶平均百分比为40.43%,编码1757个蛋白质编码基因。直系同源群聚类注释将组装基因组中的预测蛋白质分类为具有细胞、代谢和信息相关功能。使用基因组挖掘工具鉴定了一个与广谱抗菌化合物合成相关的基因簇,该基因簇经抗菌谱测试得到证实。根据溶血试验结果,确定该菌株是安全的。该菌株在胆盐和酸性条件下表现出较高的存活率,具有显著的自聚集倾向和疏水性。动物实验表明,1003菌株具有益生菌和抗菌作用,发挥抗菌作用的物质是有机酸。代谢组学分析显示,1003菌株的上清液含有七种有机酸,包括丁酸。1003菌株在基因组学、生理生化和动物实验中表现出良好的安全性和益生菌潜力,可被认为是促进畜禽健康的合适候选菌株。