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利用SCoT标记比较普通小麦品种和小黑麦品系时,原始三粒小麦品系的遗传多样性和群体结构

Genetic Diversity and Population Structure of Primary Tritipyrum Lines in Comparison with Bread Wheat Varieties and Triticale Lines using SCoT Markers.

作者信息

Rezai Marzia, Seifati S Ebrahim, Tabandeh Saravi Afagh, Shahsavand Hasani Hossein

机构信息

Department of Arid Land and Desert Management, School of Natural Resources and Desert Studies, Yazd University, Yazd, Iran.

Department of plant production and genetics, School of Agriculture, Shiraz University, Shiraz, Iran.

出版信息

Iran J Biotechnol. 2024 Jul 1;22(3):e3889. doi: 10.30498/ijb.2024.447932.3889. eCollection 2024 Jul.

Abstract

BACKGROUND

Triticale and tritipyrum as a new artificial cereal were investigated as potential stress-resistant alternatives within the Triticeae tribe due to their notable adaptability to environmental stresses.

OBJECTIVES

The first purpose of this study was to determine the genetic variation of 14 genotypes on physiological traits in arid and semi-arid climate of Yazd province on primary trans chromosomal tritipyrum (PTCT) lines, promising triticale lines, and Iranian and Afghan bread wheat cultivars, and the second purpose was to investigate the genetic diversity and classification of genotypes using start codon targeted (SCoT) markers.

MATERIALS AND METHODS

The photosynthesis pigments, proline, and catalase enzyme activity of 14 genotypes were determined. Also, genomic DNA of 10 genotypes was extracted using a modified CTAB protocol. The 13 primers were set-up for PCR and the studied parameters were analyzed with Excel, GenAlEx6.5, POPGen32, and STRUCTURE software.

RESULTS

Based on 14 amphidiploids, Triticale 4115 and PTCT line (Ka/b) (Cr/b) F had the greatest carotenoids and photosynthesis pigments values. Proline content was highest in PTCT lines (Ka/b) (Cr/b) F, triticale line 4115, and La(4B/4D)/b. The PTCT lines La/b and Az/b showed the highest (0.34) and lowest (0.04) average catalase, respectively. The investigation of genetic diversity in physiological traits related to the arid and semi-arid climate conditions of Yazd province showed that there is a great diversity between the genotypes.

摘要

背景

小黑麦和小麦偃麦草作为一种新的人工谷物,因其对环境胁迫具有显著的适应性,被作为小麦族中潜在的抗逆替代品种进行研究。

目的

本研究的首要目的是确定14个基因型在亚兹德省干旱和半干旱气候条件下,在初级端体附加小麦偃麦草(PTCT)系、优良小黑麦系以及伊朗和阿富汗面包小麦品种上生理性状的遗传变异,第二个目的是使用起始密码子靶向(SCoT)标记研究基因型的遗传多样性和分类。

材料与方法

测定了14个基因型的光合色素、脯氨酸和过氧化氢酶活性。此外,采用改良的CTAB法提取了10个基因型的基因组DNA。设置了13对引物进行PCR,并使用Excel、GenAlEx6.5、POPGen32和STRUCTURE软件对研究参数进行分析。

结果

基于14个双二倍体,小黑麦4115和PTCT系(Ka/b)(Cr/b)F的类胡萝卜素和光合色素值最高。脯氨酸含量在PTCT系(Ka/b)(Cr/b)F、小黑麦系4115和La(4B/4D)/b中最高。PTCT系La/b和Az/b的平均过氧化氢酶活性分别最高(0.34)和最低(0.04)。对与亚兹德省干旱和半干旱气候条件相关的生理性状的遗传多样性研究表明,基因型之间存在很大差异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/431b/11682527/5904a0701b19/IJB-22-e3889-g001.jpg

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