Gong Li, Klein Clarissa J, Caudle Kelly E, Moyer Ann M, Scott Stuart A, Whirl-Carrillo Michelle, Klein Teri E
Department of Biomedical Data Science, Stanford University, Stanford, CA, United States.
Department of Pharmacy and Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, United States.
Clin Chem. 2025 Jan 3;71(1):36-44. doi: 10.1093/clinchem/hvae181.
Pharmacogenomics (PGx) is focused on the relationship between an individual's genetic makeup and their response to medications, with the overarching aim of guiding prescribing decisions to improve drug efficacy and reduce adverse events. The PGx and genomic medicine communities have worked independently for over 2 decades, developing separate standards and terminology, making implementation of PGx across all areas of genomic medicine difficult. To address this issue, the Clinical Genome Resource (ClinGen) Pharmacogenomics Working Group (PGxWG) was established by the National Institutes of Health (NIH)-funded ClinGen to initially create frameworks for evaluating gene-drug response clinical validity and actionability aligned with the ClinGen frameworks for evaluating monogenic gene-disease relationships, and a framework for classifying germline PGx variants similar to the American College of Medical Genetics (ACMG) and Association of Molecular Pathology (AMP) system for interpretation of disease-causing variants. These frameworks will leverage decades of work from well-established PGx resources facilitating buy-in among PGx stakeholders. In this report, we describe the background and major activities of the ClinGen PGxWG, and how this initiative will facilitate the critical inclusion of PGx into the larger context of genomic medicine.
药物基因组学(PGx)专注于个体基因构成与其对药物反应之间的关系,其总体目标是指导处方决策,以提高药物疗效并减少不良事件。PGx和基因组医学领域已各自独立开展工作二十多年,制定了不同的标准和术语,这使得在基因组医学的所有领域实施PGx变得困难。为解决这一问题,由美国国立卫生研究院(NIH)资助的临床基因组资源(ClinGen)设立了药物基因组学工作组(PGxWG),最初旨在创建与ClinGen评估单基因疾病关系框架相一致的评估基因-药物反应临床有效性和可操作性的框架,以及一个类似于美国医学遗传学学会(ACMG)和分子病理学协会(AMP)解释致病变异系统的种系PGx变异分类框架。这些框架将利用成熟的PGx资源数十年的工作成果,促进PGx利益相关者的认同。在本报告中,我们描述了ClinGen PGxWG的背景和主要活动,以及该倡议将如何推动将PGx关键纳入更广泛的基因组医学背景。