Halegua Thibaut, Risson Valérie, Carras Julien, Rouyer Martin, Coudert Laurent, Jacquier Arnaud, Schaeffer Laurent, Ohlmann Théophile, Mangeot Philippe Emmanuel
CIRI, Centre International de Recherche en Infectiologie Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, ENS de Lyon, F-69007, Lyon, France.
Pathophysiology and Genetics of Neuron and Muscle, CNRS UMR 5261, INSERM U1315, Université Lyon1, Faculté de Médecine Lyon Est, F-69008, Lyon, France.
Nat Commun. 2025 Jan 4;16(1):397. doi: 10.1038/s41467-024-55604-0.
Prime Editing can rewrite genes in living cells by allowing point mutations, deletions, or insertion of small DNA sequences with high precision. However, its safe and efficient delivery into human stem cells remains a technical challenge. In this report, we engineer Nanoscribes, virus-like particles that encapsidate ribonucleoprotein complexes of the Prime Editing system and allow their delivery into recipient cells. We identify key features that unlock the potential of Nanoscribes, including the use of multiple fusogens, the improvement of pegRNAs structures, their encoding by a Pol II system and the optimization of Prime-Editors. Nanoscribes edit HEK293T with an efficiency of 68% at the HEK3 locus with increased fidelity over DNA-transfection and support pegRNA-multiplexing. Importantly, Nanoscribes permit editing of myoblasts, hiPSCs and hiPSCs-derived hematopoietic stem cells with an editing efficiency up to 25%. Nanoscribes is an asset for development of next generation genome editing approaches using VLPs.
碱基编辑可以通过允许点突变、缺失或高精度插入小DNA序列来重写活细胞中的基因。然而,将其安全有效地递送至人类干细胞仍然是一项技术挑战。在本报告中,我们设计了纳米转录载体,这是一种病毒样颗粒,可包裹碱基编辑系统的核糖核蛋白复合物,并使其递送至受体细胞。我们确定了释放纳米转录载体潜力的关键特性,包括使用多种融合蛋白、改进pegRNA结构、通过Pol II系统对其进行编码以及优化碱基编辑器。纳米转录载体在HEK3位点对HEK293T细胞的编辑效率为68%,与DNA转染相比保真度更高,并支持pegRNA多重编辑。重要的是,纳米转录载体能够编辑成肌细胞、人诱导多能干细胞和源自人诱导多能干细胞的造血干细胞,编辑效率高达25%。纳米转录载体是利用病毒样颗粒开发下一代基因组编辑方法的一项宝贵工具。