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欧洲和非洲血统人群中新冠病毒疾病严重程度与阿尔茨海默病之间的共享遗传结构

Shared Genetic Architecture Between COVID-19 Severity and Alzheimer's Disease Across European and African Ancestries.

作者信息

Chen Jingchun, Cammann Davis, Liu Tingwei, Liu Yimei, Cummings Melika, Chen Xiangning, Oh Edwin, Rotter Jerome

机构信息

University of Nevada Las Vegas.

The university of Texas Health Science Center at Houston.

出版信息

Res Sq. 2024 Dec 24:rs.3.rs-5619229. doi: 10.21203/rs.3.rs-5619229/v1.

DOI:10.21203/rs.3.rs-5619229/v1
PMID:39764106
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11703345/
Abstract

The global outbreak of COVID-19, caused by the SARS-CoV-2 virus, has been linked to long-term neurological complications, including an increased risk of Alzheimer's disease (AD) among older adults. However, the precise genetic impact of COVID-19 on long-term AD development remains unclear. This study leveraged genome-wide association study (GWAS) data and genotype data to explore the genetic association between AD and various COVID-19 phenotypes across European ancestry (EA) and African ancestry (AA) cohorts, and the possibility of a causal effect of COVID-19 on AD. We first calculated polygenic risk scores (PRSs) of three COVID-19 phenotypes in AD cases and controls from both EA and AA populations, then determined the genetic associations between COVID-19 PRSs and AD by logistic regression analyses with or without adjusting for age, sex, and genotypes. Significant positive associations were found between AD diagnosis and COVID-19 PRSs in both populations, with the strongest associations identified in the AA population. However, Mendelian randomization (MR) analyses revealed no evidence of a causal effect of COVID-19 phenotypes on AD liability. We explored this finding further through the analysis of shared genomic regions between the COVID-19 phenotypes and AD and found a region of overlap on chromosome 17 that was highly pleiotropic for traits implicating immune function, psychiatric disorders, and lung function phenotypes. These findings suggest that while COVID-19 and AD share overlapping polygenic contributions involving peripheral genes across multiple traits, they lack a direct connection involving core genes that drive the development of their respective pathologies.

摘要

由严重急性呼吸综合征冠状病毒2(SARS-CoV-2)病毒引起的新型冠状病毒肺炎(COVID-19)全球大流行与长期神经并发症有关,包括老年人患阿尔茨海默病(AD)的风险增加。然而,COVID-19对AD长期发展的确切遗传影响仍不清楚。本研究利用全基因组关联研究(GWAS)数据和基因型数据,探讨欧洲血统(EA)和非洲血统(AA)队列中AD与各种COVID-19表型之间的遗传关联,以及COVID-19对AD的因果效应可能性。我们首先计算了来自EA和AA人群的AD病例和对照中三种COVID-19表型的多基因风险评分(PRS),然后通过逻辑回归分析确定COVID-19 PRS与AD之间的遗传关联,分析时调整或不调整年龄、性别和基因型。在两个人群中均发现AD诊断与COVID-19 PRS之间存在显著正相关,在AA人群中相关性最强。然而,孟德尔随机化(MR)分析未发现COVID-19表型对AD易感性有因果效应的证据。我们通过分析COVID-19表型与AD之间的共享基因组区域进一步探究了这一发现,发现在17号染色体上有一个重叠区域,该区域对涉及免疫功能、精神障碍和肺功能表型的性状具有高度多效性。这些发现表明,虽然COVID-19和AD在涉及多个性状的外周基因方面有重叠的多基因贡献,但它们缺乏涉及驱动各自病理发展的核心基因的直接联系。

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本文引用的文献

1
Pervasive biases in proxy genome-wide association studies based on parental history of Alzheimer's disease.基于阿尔茨海默病家族史的代理全基因组关联研究中的普遍偏差。
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Polygenic scores and Mendelian randomization identify plasma proteins causally implicated in Alzheimer's disease.多基因评分和孟德尔随机化确定了与阿尔茨海默病有因果关系的血浆蛋白。
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Neuroinflammation in post-acute sequelae of COVID-19 (PASC) as assessed by [C]PBR28 PET correlates with vascular disease measures.
COVID-19 (PASC)后遗留期的神经炎症通过 [C]PBR28 PET 评估与血管疾病测量相关。
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Genetic correlations between Alzheimer's disease and gut microbiome genera.阿尔茨海默病与肠道微生物属之间的遗传相关性。
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A genome-wide association study identifies distinct variants associated with pulmonary function among European and African ancestries from the UK Biobank.一项全基因组关联研究鉴定了英国生物库中来自欧洲和非洲血统的人群中与肺功能相关的不同变体。
Commun Biol. 2023 Jan 14;6(1):49. doi: 10.1038/s42003-023-04443-8.
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SARS-CoV-2 infects neurons and induces neuroinflammation in a non-human primate model of COVID-19.SARS-CoV-2 感染神经元并在 COVID-19 的非人类灵长类动物模型中引发神经炎症。
Cell Rep. 2022 Nov 1;41(5):111573. doi: 10.1016/j.celrep.2022.111573. Epub 2022 Oct 12.
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Causal effect of COVID-19 on Alzheimer's disease: A Mendelian randomization study.COVID-19 对阿尔茨海默病的因果效应:一项孟德尔随机化研究。
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9
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