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用于生物分子检测的生物纳米孔技术。

Bio-nanopore technology for biomolecules detection.

作者信息

Li Peizhi, Liang Dan, Yang En, Zeb Mustafa, Huang Huiqi, Sun Haihui, Zhang Wenhan, Peng Chifang, Zhao Yuan, Ma Wei

机构信息

School of Food Science and Technology, State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi, 214122, Jiangsu, China.

Key Laboratory of Synthetic and Biological Colloids, Ministry of Education, School of Chemical and Material Engineering, Jiangnan University, Wuxi, 214122, Jiangsu, China.

出版信息

Adv Biotechnol (Singap). 2024 Dec 6;2(4):45. doi: 10.1007/s44307-024-00051-7.

DOI:10.1007/s44307-024-00051-7
PMID:39883334
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11740844/
Abstract

Bio-nanopore technology holds great promise in biomacromolecule detection, with its high throughput and low cost positioning it as an ideal detection tool. This technology employs a unique detection mechanism that utilizes nanoscale pores to rapidly and sensitively convert biological molecules interactions into electrical signals, enabling real-time, single-molecule detection with exceptional sensitivity. This review focuses on the latest advancements in this technology across various domains, including DNA and RNA sequencing, protein detection, and small molecule identification. Additionally, future trends are explored, providing a comprehensive and in-depth perspective on the role of bio-nanopore technology in biomolecule detection.

摘要

生物纳米孔技术在生物大分子检测方面具有巨大潜力,其高通量和低成本使其成为理想的检测工具。该技术采用独特的检测机制,利用纳米级孔隙将生物分子相互作用快速、灵敏地转化为电信号,实现具有卓越灵敏度的实时单分子检测。本文综述聚焦于该技术在各个领域的最新进展,包括DNA和RNA测序、蛋白质检测以及小分子鉴定。此外,还探讨了未来趋势,全面深入地阐述了生物纳米孔技术在生物分子检测中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/8e3209693861/44307_2024_51_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/f52839e19328/44307_2024_51_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/554a0a8e0f97/44307_2024_51_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/8eecc2d0dd83/44307_2024_51_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/8e3209693861/44307_2024_51_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/f52839e19328/44307_2024_51_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/554a0a8e0f97/44307_2024_51_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/8eecc2d0dd83/44307_2024_51_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f486/11740844/8e3209693861/44307_2024_51_Fig4_HTML.jpg

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1
Bio-nanopore technology for biomolecules detection.用于生物分子检测的生物纳米孔技术。
Adv Biotechnol (Singap). 2024 Dec 6;2(4):45. doi: 10.1007/s44307-024-00051-7.
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本文引用的文献

1
Multi-pass, single-molecule nanopore reading of long protein strands.多步、单分子纳米孔对长蛋白链的读取。
Nature. 2024 Sep;633(8030):662-669. doi: 10.1038/s41586-024-07935-7. Epub 2024 Sep 11.
2
Sequencing accuracy and systematic errors of nanopore direct RNA sequencing.纳米孔直接 RNA 测序的测序准确性和系统误差。
BMC Genomics. 2024 May 28;25(1):528. doi: 10.1186/s12864-024-10440-w.
3
Transfer learning enables identification of multiple types of RNA modifications using nanopore direct RNA sequencing.迁移学习可通过纳米孔直接 RNA 测序识别多种类型的 RNA 修饰。
Nat Commun. 2024 May 14;15(1):4049. doi: 10.1038/s41467-024-48437-4.
4
Nanopore DNA sequencing technologies and their applications towards single-molecule proteomics.纳米孔 DNA 测序技术及其在单分子蛋白质组学中的应用。
Nat Chem. 2024 Mar;16(3):314-334. doi: 10.1038/s41557-023-01322-x. Epub 2024 Mar 6.
5
Real-time detection of 20 amino acids and discrimination of pathologically relevant peptides with functionalized nanopore.利用功能化纳米孔实时检测 20 种氨基酸并区分病理相关肽
Nat Methods. 2024 Apr;21(4):609-618. doi: 10.1038/s41592-024-02208-7. Epub 2024 Mar 5.
6
Nanopore analysis of cis-diols in fruits.纳米孔分析水果中的顺式二醇。
Nat Commun. 2024 Mar 5;15(1):1969. doi: 10.1038/s41467-024-46303-x.
7
Nanopore analysis of salvianolic acids in herbal medicines.中草药中丹酚酸的纳米孔分析。
Nat Commun. 2024 Mar 5;15(1):1970. doi: 10.1038/s41467-024-45543-1.
8
Flexible and cost-effective genomic surveillance of P. falciparum malaria with targeted nanopore sequencing.采用靶向纳米孔测序技术对恶性疟原虫疟疾进行灵活且具有成本效益的基因组监测。
Nat Commun. 2024 Feb 15;15(1):1413. doi: 10.1038/s41467-024-45688-z.
9
Peptide sequencing based on host-guest interaction-assisted nanopore sensing.基于主客体相互作用辅助纳米孔传感的肽测序
Nat Methods. 2024 Jan;21(1):102-109. doi: 10.1038/s41592-023-02095-4. Epub 2023 Nov 13.
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The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling.最新的牛津纳米孔 R10.4.1 全长 16S rRNA 测序可实现精确解析物种水平的微生物群落组成。
Appl Environ Microbiol. 2023 Oct 31;89(10):e0060523. doi: 10.1128/aem.00605-23. Epub 2023 Oct 6.