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小麦中FtsH基因家族的全基因组鉴定与综合分析

Genome-wide identification and comprehensive analysis of the FtsH gene family in wheat.

作者信息

Li Yuwei, Liu Hao, Wang Xiaoyu, Wang Bo

机构信息

College of Chemical and Biological Engineering, Shandong University of Science and Technology, Qingdao, Shandong, People's Republic of China.

College of Horticulture, Ludong University, Yantai, Shandong, People's Republic of China.

出版信息

Mol Biol Rep. 2025 Feb 3;52(1):186. doi: 10.1007/s11033-025-10243-6.

DOI:10.1007/s11033-025-10243-6
PMID:39899074
Abstract

BACKGROUND

The filamentation temperature-sensitive H (FtsH) gene family, which is known to play a critical role in plant growth and development by regulating photosynthesis, chloroplast development, and response to plant stress, has been extensively studied in various species. However, the FtsH gene family in wheat has not been previously documented.

METHODS AND RESULTS

In this study, 38 TaFtsH gene family members were identified, divided into eight groups and unevenly distributed across various chromosomes. Analysis of gene structure and conserved motifs revealed that TaFtsH genes within the same taxon share similar gene structures and conserved motifs. Further collinearity analysis provided insights into the evolutionary history of TaFtsH genes. Examination of cis-acting elements in the promoter region of TaFtsH genes revealed the presence of developmental and stress response elements in genes. The expression pattern of the wheat FtsH gene under various abiotic stresses was analyzed using real-time fluorescence quantitative PCR. Additionally, transient expression in tobacco verified the localization of the TaFtsH11-B protein in chloroplasts.

CONCLUSIONS

These findings collectively contribute to laying the groundwork for the functional characterization of TaFtsH genes.

摘要

背景

丝状温度敏感H(FtsH)基因家族通过调节光合作用、叶绿体发育以及对植物胁迫的响应,在植物生长和发育中发挥关键作用,已在多种物种中得到广泛研究。然而,小麦中的FtsH基因家族此前尚未见报道。

方法与结果

在本研究中,鉴定出38个TaFtsH基因家族成员,分为八组,在不同染色体上分布不均。对基因结构和保守基序的分析表明,同一分类群内的TaFtsH基因具有相似的基因结构和保守基序。进一步的共线性分析为TaFtsH基因的进化历史提供了见解。对TaFtsH基因启动子区域顺式作用元件的检测揭示了基因中存在发育和胁迫响应元件。利用实时荧光定量PCR分析了小麦FtsH基因在各种非生物胁迫下的表达模式。此外,在烟草中的瞬时表达验证了TaFtsH11-B蛋白在叶绿体中的定位。

结论

这些发现共同为TaFtsH基因的功能表征奠定了基础。

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本文引用的文献

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Overexpression of the plastidial pseudo-protease AtFtsHi3 enhances drought tolerance while sustaining plant growth.过表达质体拟蛋白酶 AtFtsHi3 增强耐旱性,同时维持植物生长。
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Heterologous overexpression of Tawzy1-2 gene encoding an SK dehydrin enhances multiple abiotic stress tolerance in Escherichia coli and Nicotiania benthamiana.异源过表达编码 SK 脱水素的 Tawzy1-2 基因增强大肠杆菌和烟草对多种非生物胁迫的耐受性。
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Identification of Whirly transcription factors in Triticeae species and functional analysis of in response to osmotic stress.小麦族物种中Whirly转录因子的鉴定及其对渗透胁迫响应的功能分析
Front Plant Sci. 2023 Dec 5;14:1297228. doi: 10.3389/fpls.2023.1297228. eCollection 2023.
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Int J Mol Sci. 2023 Nov 30;24(23):16996. doi: 10.3390/ijms242316996.
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TBtools-II: A "one for all, all for one" bioinformatics platform for biological big-data mining.TBtools-II:一个“一专多能”的生物信息学大数据挖掘平台。
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CsCIPK11-Regulated Metalloprotease CsFtsH5 Mediates the Cold Response of Tea Plants.CsCIPK11 调控的金属蛋白酶 CsFtsH5 介导茶树的冷响应。
Int J Mol Sci. 2023 Mar 27;24(7):6288. doi: 10.3390/ijms24076288.
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Plant Cell Environ. 2023 Mar;46(3):850-864. doi: 10.1111/pce.14525. Epub 2023 Jan 4.
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BMC Genomics. 2022 Jul 12;23(1):503. doi: 10.1186/s12864-022-08719-x.