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周期性GFN1-xTB紧密结合:一种用于克洛普曼-大野函数的广义埃瓦尔德划分方案。

Periodic GFN1-xTB Tight Binding: A Generalized Ewald Partitioning Scheme for the Klopman-Ohno Function.

作者信息

Buccheri Alexander, Li Rui, Deustua J Emiliano, Moosavi S Mohamad, Bygrave Peter J, Manby Frederick R

机构信息

School of Chemistry, University of Bristol, Cantocks Close, Bristol BS8 1TS, United Kingdom.

Department of Physics, Max Planck Institute for the Structure and Dynamics of Matter, Luruper Ch 149, 22761 Hamburg, Germany.

出版信息

J Chem Theory Comput. 2025 Feb 25;21(4):1615-1625. doi: 10.1021/acs.jctc.4c01234. Epub 2025 Feb 5.

DOI:10.1021/acs.jctc.4c01234
PMID:39908124
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11866747/
Abstract

A novel formulation is presented for the treatment of electrostatics in the periodic GFN1-xTB tight-binding model. Periodic GFN1-xTB is hindered by the functional form of the second-order electrostatics, which only recovers Coulombic behavior at large interatomic distances and lacks a closed-form solution for its Fourier transform. We address this by introducing a binomial expansion of the Klopman-Ohno function to partition short- and long-range interactions, enabling the use of a generalized Ewald summation for the solution of the electrostatic energy. This approach is general and is applicable to any damped potential of the form | + |. Benchmarks on the X23 molecular crystal dataset and a range of prototypical bulk semiconductors demonstrate that this systematic treatment of the electrostatics eliminates unphysical behavior in the equation of state curves. In the bulk systems studied, we observe a mean absolute error in total energy of 35 meV/atom, comparable to the machine-learned universal force field, M3GNet, and sufficiently precise for structure relaxation. These results highlight the promising potential of GFN1-xTB as a universal tight-binding parametrization.

摘要

本文提出了一种用于处理周期性GFN1-xTB紧束缚模型中静电问题的新公式。周期性GFN1-xTB受到二阶静电函数形式的阻碍,该函数仅在大原子间距时恢复库仑行为,并且其傅里叶变换缺乏封闭形式的解。我们通过引入克洛普曼-大野函数的二项式展开来划分短程和长程相互作用,从而能够使用广义埃瓦尔德求和来求解静电能。这种方法具有通用性,适用于任何形式为| + |的阻尼势。对X23分子晶体数据集和一系列典型体半导体的基准测试表明,这种对静电的系统处理消除了状态方程曲线中的非物理行为。在所研究的体系统中,我们观察到总能量的平均绝对误差为35 meV/原子,与机器学习的通用力场M3GNet相当,并且对于结构弛豫来说足够精确。这些结果突出了GFN1-xTB作为一种通用紧束缚参数化方法的潜在前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11866747/6f64f2614d92/ct4c01234_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11866747/ae2d9d7c95fd/ct4c01234_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11866747/2ca0fdecdf1f/ct4c01234_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11866747/6f64f2614d92/ct4c01234_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11866747/ae2d9d7c95fd/ct4c01234_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11866747/2ca0fdecdf1f/ct4c01234_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11866747/6f64f2614d92/ct4c01234_0003.jpg

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本文引用的文献

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A universal graph deep learning interatomic potential for the periodic table.一种用于元素周期表的通用图深度学习原子间势能。
Nat Comput Sci. 2022 Nov;2(11):718-728. doi: 10.1038/s43588-022-00349-3. Epub 2022 Nov 28.
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High-throughput screening of spin states for transition metal complexes with spin-polarized extended tight-binding methods.
使用自旋极化扩展紧束缚方法对过渡金属配合物的自旋态进行高通量筛选。
J Comput Chem. 2023 Oct 15;44(27):2120-2129. doi: 10.1002/jcc.27185. Epub 2023 Jul 4.
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ONIOM meets : efficient, accurate, and robust multi-layer simulations across the periodic table.ONIOM 相遇:高效、准确、稳健的多层面跨周期表模拟。
Phys Chem Chem Phys. 2023 Jul 12;25(27):17860-17868. doi: 10.1039/d3cp02178e.
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Spin-orbit coupling corrections for the GFN-xTB method.自旋轨道耦合修正的 GFN-xTB 方法。
J Chem Phys. 2023 Jan 28;158(4):044120. doi: 10.1063/5.0129071.
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Nonadiabatic Molecular Dynamics with Extended Density Functional Tight-Binding: Application to Nanocrystals and Periodic Solids.基于扩展密度泛函紧束缚方法的非绝热分子动力学:在纳米晶体和周期性固体中的应用
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