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肥胖相关肠道微生物群的机器学习预测:鉴定作为潜在治疗靶点。

Machine learning prediction of obesity-associated gut microbiota: identifying as a potential therapeutic target.

作者信息

Wu Hao, Li Yuan, Jiang Yuxuan, Li Xinran, Wang Shenglan, Zhao Changle, Yang Ximiao, Chang Baocheng, Yang Juhong, Qiao Jianjun

机构信息

Zhejiang Institute of Tianjin University (Shaoxing), Shaoxing, China.

NHC Key Lab of Hormones and Development and Tianjin Key Lab of Metabolic Diseases, Tianjin Medical University Chu Hsien-I Memorial Hospital & Institute of Endocrinology, Tianjin, China.

出版信息

Front Microbiol. 2025 Feb 5;15:1488656. doi: 10.3389/fmicb.2024.1488656. eCollection 2024.

Abstract

BACKGROUND

The rising prevalence of obesity and related metabolic disorders highlights the urgent need for innovative research approaches. Utilizing machine learning (ML) algorithms to predict obesity-associated gut microbiota and validating their efficacy with specific bacterial strains could significantly enhance obesity management strategies.

METHODS

We leveraged gut microbiome data from 1,563 healthy individuals and 2,043 overweight patients sourced from the GMrepo database. We assessed the anti-obesity effects of through experimentation with and C3H10T1/2 cells.

RESULTS

Our analysis revealed a significant correlation between gut bacterial composition and body weight. The top 40 bacterial species were utilized to develop ML models, with XGBoost demonstrating the highest predictive accuracy. SHAP analysis indicated a negative association between the relative abundance of six bacterial species, including , and body mass index (BMI). Furthermore, was shown to reduce lipid accumulation in and inhibit lipid differentiation in C3H10T1/2 cells.

CONCLUSION

holds potential as a therapeutic agent for managing diet-induced obesity, underscoring its relevance in microbiome-based obesity research and intervention.

摘要

背景

肥胖及相关代谢紊乱的患病率不断上升,凸显了对创新研究方法的迫切需求。利用机器学习(ML)算法预测与肥胖相关的肠道微生物群,并通过特定细菌菌株验证其功效,可显著增强肥胖管理策略。

方法

我们利用了来自GMrepo数据库的1563名健康个体和2043名超重患者的肠道微生物组数据。我们通过对 和C3H10T1/2细胞进行实验,评估了 的抗肥胖作用。

结果

我们的分析揭示了肠道细菌组成与体重之间存在显著相关性。利用排名前40的细菌种类开发了ML模型,其中XGBoost表现出最高的预测准确性。SHAP分析表明,包括 在内的六种细菌种类的相对丰度与体重指数(BMI)呈负相关。此外, 被证明可减少 中的脂质积累,并抑制C3H10T1/2细胞中的脂质分化。

结论

作为治疗饮食诱导性肥胖的药物具有潜力,强调了其在基于微生物组的肥胖研究和干预中的相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4337/11839209/22d849748e90/fmicb-15-1488656-g001.jpg

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