Trosset Jean-Yves, Bernot Gilles
Sup'Biotech, BIRL, Villejuif, France.
Université Côte d'Azur, CNRS, I3S, Sophia Antipolis, France.
Methods Mol Biol. 2025;2905:1-16. doi: 10.1007/978-1-0716-4418-8_1.
The dynamics of the cell signaling network is highly regulated to adapt to temporal fluctuations and spatial heterogeneity of the microenvironment. Formal modeling of biological regulatory networks is an approach to identify which key components of this biological network, sometimes individual therapeutic targets, have a long-term influence on a disease-related phenotype of interest. We present an in silico formal screening strategy in the context of cancer metabolism to identify key hot spots in the metabolic network that could induce a systemic change of pathological cell phenotype such as the reversal of the Warburg effect.
细胞信号网络的动态变化受到高度调控,以适应微环境的时间波动和空间异质性。生物调控网络的形式化建模是一种确定该生物网络哪些关键成分(有时是个别治疗靶点)对感兴趣的疾病相关表型具有长期影响的方法。我们在癌症代谢背景下提出一种计算机形式化筛选策略,以识别代谢网络中可能诱导病理细胞表型系统性变化(如瓦伯格效应逆转)的关键热点。