Cook Brian D, Narehood Sarah M, McGuire Kelly L, Li Yizhou, Akif Tezcan F, Herzik Mark A
Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, USA.
Nat Commun. 2025 Apr 14;16(1):3528. doi: 10.1038/s41467-025-58243-1.
High-quality grid preparation for single-particle cryogenic electron microscopy (cryoEM) remains a bottleneck for routinely obtaining high-resolution structures. The issues that arise from traditional grid preparation workflows are particularly exacerbated for oxygen-sensitive proteins, including metalloproteins, whereby oxygen-induced damage and alteration of oxidation states can result in protein inactivation, denaturation, and/or aggregation. Indeed, 99% of the current structures in the EMBD were prepared aerobically and limited successes for anaerobic cryoEM grid preparation exist. Current practices for anaerobic grid preparation involve a vitrification device located in an anoxic chamber, which presents significant challenges including temperature and humidity control, optimization of freezing conditions, costs for purchase and operation, as well as accessibility. Here, we present a streamlined approach that allows for the vitrification of oxygen-sensitive proteins in reduced states using an automated blot-free grid vitrification device - the SPT Labtech chameleon. This robust workflow allows for high-resolution structure determination of dynamic, oxygen-sensitive proteins, of varying complexity and molecular weight.
用于单颗粒低温电子显微镜(cryoEM)的高质量网格制备仍然是常规获得高分辨率结构的瓶颈。传统网格制备工作流程中出现的问题对于包括金属蛋白在内的对氧敏感的蛋白质来说尤为严重,在这种情况下,氧诱导的损伤和氧化态的改变会导致蛋白质失活、变性和/或聚集。事实上,EMBD中目前99%的结构都是在有氧条件下制备的,而厌氧cryoEM网格制备的成功案例有限。目前厌氧网格制备的方法是将玻璃化装置置于缺氧室中,这带来了包括温度和湿度控制、冷冻条件优化、购买和操作成本以及可及性等重大挑战。在此,我们提出了一种简化的方法,该方法使用自动无印迹网格玻璃化装置——SPT Labtech变色龙,能够对处于还原状态的氧敏感蛋白质进行玻璃化。这种强大的工作流程能够对不同复杂程度和分子量的动态、氧敏感蛋白质进行高分辨率结构测定。