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墨西哥湾海洋沉积物中一个细菌群落对重质原油芳烃馏分进行生物降解期间的种群动态

Population dynamics of a bacterial consortium from a marine sediment of the Gulf of Mexico during biodegradation of the aromatic fraction of heavy crude oil.

作者信息

Muñoz-Rivera Maria-Pilar, Martínez-Morales Fernando, Guzmán-Morales Daniel, Rivera-Ramírez Abraham, Sánchez-Reyes Ayixon, Trejo-Hernández María R

机构信息

Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos, 62209, México.

Investigador Por México, Secihti-Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad 2001, Col. Chamilpa, Cuernavaca, Morelos, 62210, México.

出版信息

Int Microbiol. 2025 Apr 16. doi: 10.1007/s10123-025-00659-2.

DOI:10.1007/s10123-025-00659-2
PMID:40240641
Abstract

In the marine environment, uncontained crude oil is dispersed and degraded by abiotic or biotic processes; native bacterial populations gradually adapt to integrate interspecific and intraspecific metabolic networks for efficient and dynamic utilization of xenobiotic substrates as carbon source. Aromatic compounds accumulate in marine sediments and bacterial populations at these sites play a crucial role in the mobilization of those complex molecules into the global geochemical cycles. The aim of this work was to use native bacteria from a marine sediment sample in the Gulf of Mexico to enhance the biodegradation of the aromatic fraction from a heavy crude oil, as the sole carbon source, during a 200-day microcosm experiment. This process involved the gradual increase of the aromatic fraction into the culture to promote bacterial enrichment; the increase in viable cells correlated well with a biodegradation pattern of the aromatic fraction at some points. Bacterial biodiversity, as revealed by metagenomic and microbiological approaches, indicates that bacterial groups are present at all fraction concentrations, but with changes in abundance, richness and dominance. Population dynamics revealed the presence of bacteria that modify emulsification and surface tension reduction values, which could promote the incorporation of the highly hydrophobic polyaromatic compounds into the culture aqueous phase for their biodegradation by hydrocarbonoclastic bacteria present. On the other hand, the presence of non-hydrocarbonoclastic bacteria probably is sustained by cross-feeding events involving sugars, amino acids, short carbon compounds, lipids produced by the former bacteria by co-metabolism of complex aromatic substrates, which are transformed into diverse biomolecules for biofilm development to promote a bacterial population dynamics adapted to this environment.

摘要

在海洋环境中,未受控制的原油通过非生物或生物过程分散和降解;本地细菌种群逐渐适应整合种间和种内代谢网络,以便高效、动态地利用异源生物底物作为碳源。芳香族化合物在海洋沉积物中积累,这些地点的细菌种群在将这些复杂分子纳入全球地球化学循环中发挥着关键作用。这项工作的目的是在一项为期200天的微观实验中,利用来自墨西哥湾海洋沉积物样本中的本地细菌,以重质原油的芳香族馏分作为唯一碳源,增强其生物降解。这个过程包括将芳香族馏分逐渐添加到培养物中以促进细菌富集;在某些点上,活细胞数量的增加与芳香族馏分的生物降解模式密切相关。宏基因组学和微生物学方法揭示的细菌生物多样性表明,在所有馏分浓度下都存在细菌群,但在丰度、丰富度和优势度方面有所变化。种群动态揭示了存在一些能改变乳化和表面张力降低值的细菌,这可能会促进高度疏水的多环芳烃化合物融入培养物水相,以便由存在的烃类分解细菌对其进行生物降解。另一方面,非烃类分解细菌的存在可能是通过涉及糖、氨基酸、短链碳化合物、前一类细菌通过复杂芳香底物的共代谢产生的脂质的交叉喂养事件来维持的,这些物质被转化为各种生物分子用于生物膜形成,以促进适应这种环境的细菌种群动态。

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