Yuan Qingchen, Sun Na, Zheng Jiayu, Wang Yingxuan, Yan Xiaole, Mai Wuqian, Liao Yuhua, Chen Xiao
Department of Cardiology, Tongji Medical College, Union Hospital, Huazhong University of Science and Technology, Wuhan, China.
Key Lab of Molecular Biological Targeted Therapies of the Ministry of Education, Tongji Medical College, Union Hospital, Huazhong University of Science and Technology, Wuhan, China.
Front Oncol. 2020 Jan 10;9:1502. doi: 10.3389/fonc.2019.01502. eCollection 2019.
FUN14 domain containing 1 (FUNDC1) plays a pivotal role in mitochondrial autophagy (mitophagy), which is closely associated with human immunity. However, the role of FUNDC1 in cancers remains unclear. This study aimed to visualize the prognostic landscape of FUNDC1 in pan-cancer and investigate the relationship between FUNDC1 expression and immune infiltration. In this study, we explored the expression pattern and prognostic value of FUNDC1 in pan-cancer across multiple databases, including ONCOMINE, PrognoScan, GEPIA, and Kaplan-Meier Plotter. Then, using the GEPIA and TIMER databases, we investigated the correlations between FUNDC1 expression and immune infiltration in cancers, especially liver hepatocellular carcinoma (LIHC), and lung squamous cell carcinoma (LUSC). In general, compared with that in normal tissue, tumor tissue had a higher expression level of FUNDC1. Although FUNDC1 showed a protective effect on pan-cancer, a high expression level of FUNDC1 was detrimental to the survival of LIHC patients. Although different from what was found for LUSC, for LIHC, there were significant positive correlations between FUNDC1 expression and immune infiltrates, including B cells, CD8+ T cells, CD4+ T cells, neutrophils, macrophages, and dendritic cells. Furthermore, markers of infiltrating immune cells, such as tumor-associated-macrophages (TAMs), exhibited different FUNDC1-related immune infiltration patterns. The mitophagy regulator FUNDC1 can serve as a prognostic biomarker in pan-cancer and is correlated with immune infiltrates.
含FUN14结构域蛋白1(FUNDC1)在线粒体自噬(mitophagy)中起关键作用,而线粒体自噬与人体免疫密切相关。然而,FUNDC1在癌症中的作用仍不清楚。本研究旨在可视化FUNDC1在泛癌中的预后情况,并探究FUNDC1表达与免疫浸润之间的关系。在本研究中,我们通过多个数据库,包括ONCOMINE、PrognoScan、GEPIA和Kaplan-Meier Plotter,探索了FUNDC1在泛癌中的表达模式和预后价值。然后,利用GEPIA和TIMER数据库,我们研究了FUNDC1表达与癌症尤其是肝细胞肝癌(LIHC)和肺鳞状细胞癌(LUSC)免疫浸润之间的相关性。总体而言,与正常组织相比,肿瘤组织中FUNDC1的表达水平更高。尽管FUNDC1对泛癌显示出保护作用,但FUNDC1的高表达水平对LIHC患者的生存不利。尽管与LUSC的情况不同,但对于LIHC,FUNDC1表达与免疫浸润细胞包括B细胞、CD8 + T细胞、CD4 + T细胞、中性粒细胞、巨噬细胞和树突状细胞之间存在显著正相关。此外,浸润免疫细胞的标志物如肿瘤相关巨噬细胞(TAM)表现出不同的与FUNDC1相关的免疫浸润模式。线粒体自噬调节因子FUNDC1可作为泛癌的预后生物标志物,并与免疫浸润相关。