Jeong Su On, Kim Hyun Ju, Lee Sang Jun
Department of Systems Biotechnology, and Institute of Microbiomics, Chung-Ang University, Anseong 17546, Republic of Korea.
Biological Resources Research Department, Nakdonggang National Institute of Biological Resources (NNIBR), Sangju 37242, Republic of Korea.
J Microbiol Biotechnol. 2025 Apr 23;35:e2502021. doi: 10.4014/jmb.2502.02021.
Microbial adaptive laboratory evolution is a powerful approach for uncovering novel gene functions within metabolic pathways. Building on our previous discovery of ExuT as a glucose transporter in -deficient , this study investigates strains lacking recognized glucose transporters (, , and ). Successive rounds of experimental evolution revealed key genetic adaptations, including loss-of-function mutations in and , which encode repressors of the maltose and N-acetylglucosamine phosphotransferase systems (PTS), respectively. Additionally, a gain-of-function mutation in , a component of the galactitol PTS EIIC, was identified. The functional significance of these mutations was validated through transcript analysis, genetic knockouts, and CRISPR-Cas9-mediated site-specific genome mutagenesis, with a particular focus on the missense mutation (F340C). The resulting modifications were examined for their effects on sugar specificity and metabolic flux. Furthermore, our findings identified succinate as the predominant fermentation product in engineered strains utilizing alternative glucose transport pathways, including the maltose, N-acetylglucosamine, and galactitol PTS. This study advances our understanding of sugar transport mechanisms in and offers insights into regulatory networks, fermentative metabolism, and substrate specificity, which can be leveraged for evolutionary engineering in biotechnological applications.
微生物适应性实验室进化是一种揭示代谢途径中新型基因功能的强大方法。基于我们之前发现ExuT作为缺乏[具体物质]时的葡萄糖转运蛋白,本研究调查了缺乏公认葡萄糖转运蛋白([具体转运蛋白名称1]、[具体转运蛋白名称2]和[具体转运蛋白名称3])的菌株。连续几轮的实验进化揭示了关键的遗传适应性变化,包括[基因1]和[基因2]中的功能丧失突变,它们分别编码麦芽糖和N - 乙酰葡糖胺磷酸转移酶系统(PTS)的阻遏物。此外,还鉴定出了半乳糖醇PTS EIIC的一个组成部分[基因3]中的功能获得性突变。通过转录分析、基因敲除和CRISPR - Cas9介导的位点特异性基因组诱变验证了这些突变的功能意义,特别关注[具体基因]的错义突变(F340C)。研究了由此产生的修饰对糖特异性和代谢通量的影响。此外,我们的研究结果确定琥珀酸是利用替代葡萄糖转运途径(包括麦芽糖、N - 乙酰葡糖胺和半乳糖醇PTS)的工程菌株中的主要发酵产物。本研究推进了我们对[具体微生物名称]中糖转运机制的理解,并为调控网络、发酵代谢和底物特异性提供了见解,这些可用于生物技术应用中的进化工程。