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用于调节……中必需基因表达的四环素可抑制系统的改造

Adaptation of the tetracycline-repressible system for modulating the expression of essential genes in .

作者信息

Fu Ci, Robbins Nicole, Cowen Leah E

机构信息

Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.

出版信息

mSphere. 2025 May 27;10(5):e0101824. doi: 10.1128/msphere.01018-24. Epub 2025 May 1.

Abstract

The opportunistic human fungal pathogen has an enormous impact on human health as the causative agent of cryptococcal meningitis, and there is a dire need to expand our current antifungal arsenal. Essential gene products often serve as ideal targets for antimicrobials, and identifying and characterizing essential genes in a pathogen of interest is critical for drug development. Unfortunately, characterization of essential genes in is limited due to its haploid nature and lack of genetic tools for generating effective conditional-expression mutants. To date, the copper-repressible promoter is the most widely used system to regulate essential gene expression; however, its expression is leaky and copper has pleiotropic effects. In diverse fungal species, including , , and , the tetracycline-repressible promoter system is a powerful tool to regulate gene expression; however, it has yet to be adapted for . In this study, we successfully implemented the tetracycline-repressible system in to regulate the expression of the essential genes and . Supplementation of cultures with the tetracycline analog doxycycline efficiently depleted at both transcript and protein levels and inhibited growth and viability. Similarly, the depletion of with doxycycline enhanced sensitivity of the strain to the echinocandin caspofungin, an antifungal that targets the glucan synthase but is generally ineffective against . Thus, this work unveils a novel approach to generate conditional-expression mutants in providing unprecedented potential to systematically study essential gene function in this important human fungal pathogen.IMPORTANCEInvasive fungal infections cause millions of deaths annually, while the number of antifungals available to combat these pathogens is limited to only three classes: polyenes, azoles, and echinocandins. The largest source of novel antifungal drug targets are essential gene products, which are required for cellular viability. However, tools to identify and characterize essential genes in are extremely limited. Here, we adapted the tetracycline-repressible promoter system, that has been widely used in other organisms, to study essential gene function in . By placing this regulatable promoter upstream of the essential genes and , we confirmed that the growth of the strains in the presence of the tetracycline analog doxycycline results in the depletion of essential gene expression. This approach provides a significant advance for the systematic study of essential genes in .

摘要

这种机会性人类真菌病原体作为隐球菌性脑膜炎的病原体,对人类健康有着巨大影响,因此迫切需要扩充我们现有的抗真菌药物库。必需基因产物通常是理想的抗菌靶点,识别并表征目标病原体中的必需基因对于药物研发至关重要。不幸的是,由于其单倍体性质以及缺乏用于生成有效条件表达突变体的遗传工具,对该病原体中必需基因的表征受到限制。迄今为止,铜抑制型启动子是调控必需基因表达最广泛使用的系统;然而,其表达存在渗漏,且铜具有多效性。在包括该病原体在内的多种真菌物种中,四环素抑制型启动子系统是调控基因表达的有力工具;然而,它尚未适用于该病原体。在本研究中,我们成功地在该病原体中实施了四环素抑制系统,以调控必需基因和的表达。用四环素类似物强力霉素补充培养物可在转录和蛋白水平有效消耗,抑制其生长和活力。同样,用强力霉素消耗可增强该菌株对棘白菌素卡泊芬净的敏感性,卡泊芬净是一种靶向葡聚糖合酶的抗真菌药物,但通常对该病原体无效。因此,这项工作揭示了一种在该病原体中生成条件表达突变体的新方法,为系统研究这种重要人类真菌病原体中的必需基因功能提供了前所未有的潜力。

重要性

侵袭性真菌感染每年导致数百万人死亡,而用于对抗这些病原体的抗真菌药物数量仅限于三类:多烯类、唑类和棘白菌素类。新型抗真菌药物靶点的最大来源是细胞存活所必需的必需基因产物。然而,识别和表征该病原体中必需基因的工具极其有限。在这里,我们采用了在其他生物体中广泛使用的四环素抑制型启动子系统,来研究该病原体中的必需基因功能。通过将这个可调控启动子置于必需基因和的上游,我们证实了在四环素类似物强力霉素存在的情况下菌株的生长会导致必需基因表达的消耗。这种方法为系统研究该病原体中的必需基因提供了重大进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b264/12108051/bdd342011e9c/msphere.01018-24.f001.jpg

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