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通过使用原始“理想”衍射图谱训练卷积神经网络来预测空间群和晶胞体积及其在“真实”实验数据中的应用。

Prediction of the space group and cell volume by training a convolutional neural network with primitive 'ideal' diffraction profiles and its application to 'real' experimental data.

作者信息

Ozaki Hiroyuki, Ishida Naoya, Kiyobayashi Tetsu

机构信息

Research Institute of Electrochemical Energy, Department of Energy and Environment National Institute of Advanced Industrial Science and Technology (AIST) 1-8-31 Midorigaoka Ikeda Osaka563-8577 Japan.

出版信息

J Appl Crystallogr. 2025 Apr 25;58(Pt 3):718-730. doi: 10.1107/S1600576725002419. eCollection 2025 Jun 1.

DOI:10.1107/S1600576725002419
PMID:40475932
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12135985/
Abstract

This study describes a deep learning approach to predict the space group and unit-cell volume of inorganic crystals from their powder X-ray diffraction profiles. Using an inorganic crystallographic database, convolutional neural network (CNN) models were successfully constructed with the δ-function-like 'ideal' X-ray diffraction profiles derived solely from the intrinsic properties of the crystal structure, which are dependent on neither the incident X-ray wavelength nor the line shape of the profiles. We examined how the statistical metrics ( the prediction accuracy, precision and recall) are influenced by the ensemble averaging technique and the multi-task learning approach; six CNN models were created from an identical data set for the former, and the space group classification was coupled with the unit-cell volume prediction in a CNN architecture for the latter. The CNN models trained in the 'ideal' world were tested with 'real' X-ray profiles for eleven materials such as TiO, LiNiO and LiMnO. While the models mostly fared well in the 'real' world, the cases at odds were scrutinized to elucidate the causes of the mismatch. Specifically for LiMnO, detailed crystallographic considerations revealed that the mismatch can stem from the state of the specific material and/or from the quality of the experimental data, and not from the CNN models. The present study demonstrates that we can obviate the need for emulating experimental diffraction profiles in training CNN models to elicit structural information, thereby focusing efforts on further improvements.

摘要

本研究描述了一种深度学习方法,用于从粉末X射线衍射图谱预测无机晶体的空间群和晶胞体积。利用一个无机晶体学数据库,仅从晶体结构的固有特性导出的类似δ函数的“理想”X射线衍射图谱成功构建了卷积神经网络(CNN)模型,这些特性既不依赖于入射X射线波长,也不依赖于图谱的线形。我们研究了统计指标(预测准确率、精确率和召回率)如何受到总体平均技术和多任务学习方法的影响;对于前者,从相同的数据集中创建了六个CNN模型,对于后者,在一个CNN架构中将空间群分类与晶胞体积预测相结合。在“理想”世界中训练的CNN模型用十一种材料(如TiO、LiNiO和LiMnO)的“真实”X射线图谱进行了测试。虽然模型在“真实”世界中大多表现良好,但对不一致的情况进行了仔细审查以阐明不匹配的原因。特别是对于LiMnO,详细的晶体学考虑表明,不匹配可能源于特定材料的状态和/或实验数据的质量,而不是源于CNN模型。本研究表明,我们可以避免在训练CNN模型以获取结构信息时模拟实验衍射图谱的需要,从而将精力集中在进一步改进上。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/8f096cb50b76/j-58-00718-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/7135e45a0d6e/j-58-00718-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/ab4b8169b15a/j-58-00718-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/a076b3486cff/j-58-00718-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/7b97cd642cb8/j-58-00718-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/8f096cb50b76/j-58-00718-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/7135e45a0d6e/j-58-00718-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/ab4b8169b15a/j-58-00718-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/a076b3486cff/j-58-00718-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/7b97cd642cb8/j-58-00718-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e8a/12135985/8f096cb50b76/j-58-00718-fig5.jpg

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2
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J Appl Crystallogr. 2022 Jul 28;55(Pt 4):882-889. doi: 10.1107/S1600576722006069. eCollection 2022 Aug 1.
3
Using a machine learning approach to determine the space group of a structure from the atomic pair distribution function.
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Acta Crystallogr A Found Adv. 2019 Jul 1;75(Pt 4):633-643. doi: 10.1107/S2053273319005606. Epub 2019 Jun 26.
4
Insightful classification of crystal structures using deep learning.利用深度学习进行有洞察力的晶体结构分类。
Nat Commun. 2018 Jul 17;9(1):2775. doi: 10.1038/s41467-018-05169-6.
5
Crystal Graph Convolutional Neural Networks for an Accurate and Interpretable Prediction of Material Properties.晶体图卷积神经网络实现材料属性的精确和可解释预测。
Phys Rev Lett. 2018 Apr 6;120(14):145301. doi: 10.1103/PhysRevLett.120.145301.
6
Classification of crystal structure using a convolutional neural network.使用卷积神经网络对晶体结构进行分类。
IUCrJ. 2017 Jun 13;4(Pt 4):486-494. doi: 10.1107/S205225251700714X. eCollection 2017 Jul 1.
7
The atomic simulation environment-a Python library for working with atoms.原子模拟环境——一个用于处理原子的Python库。
J Phys Condens Matter. 2017 Jul 12;29(27):273002. doi: 10.1088/1361-648X/aa680e. Epub 2017 Mar 21.
8
Mastering the game of Go with deep neural networks and tree search.用深度神经网络和树搜索掌握围棋游戏。
Nature. 2016 Jan 28;529(7587):484-9. doi: 10.1038/nature16961.
9
Crystallography Open Database - an open-access collection of crystal structures.晶体学开放数据库——一个晶体结构的开放获取集合。
J Appl Crystallogr. 2009 Aug 1;42(Pt 4):726-729. doi: 10.1107/S0021889809016690. Epub 2009 May 30.
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