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使用卷积神经网络集成模型和统一实验设计方法对 chest CT 图像进行 COVID-19 阳性/阴性分类。

Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method.

机构信息

School of Nursing, Kaohsiung Medical University, Kaohsiung, 807, Taiwan.

Superintendent Office, Kaohsiung Medical University Hospital, Kaohsiung, 807, Taiwan.

出版信息

BMC Bioinformatics. 2021 Nov 8;22(Suppl 5):147. doi: 10.1186/s12859-021-04083-x.

Abstract

BACKGROUND

To classify chest computed tomography (CT) images as positive or negative for coronavirus disease 2019 (COVID-19) quickly and accurately, researchers attempted to develop effective models by using medical images.

RESULTS

A convolutional neural network (CNN) ensemble model was developed for classifying chest CT images as positive or negative for COVID-19. To classify chest CT images acquired from COVID-19 patients, the proposed COVID19-CNN ensemble model combines the use of multiple trained CNN models with a majority voting strategy. The CNN models were trained to classify chest CT images by transfer learning from well-known pre-trained CNN models and by applying their algorithm hyperparameters as appropriate. The combination of algorithm hyperparameters for a pre-trained CNN model was determined by uniform experimental design. The chest CT images (405 from COVID-19 patients and 397 from healthy patients) used for training and performance testing of the COVID19-CNN ensemble model were obtained from an earlier study by Hu in 2020. Experiments showed that, the COVID19-CNN ensemble model achieved 96.7% accuracy in classifying CT images as COVID-19 positive or negative, which was superior to the accuracies obtained by the individual trained CNN models. Other performance measures (i.e., precision, recall, specificity, and F-score) obtained bythe COVID19-CNN ensemble model were higher than those obtained by individual trained CNN models.

CONCLUSIONS

The COVID19-CNN ensemble model had superior accuracy and excellent capability in classifying chest CT images as COVID-19 positive or negative.

摘要

背景

为了快速准确地对 2019 年冠状病毒病(COVID-19)的胸部计算机断层扫描(CT)图像进行阳性或阴性分类,研究人员试图通过使用医学图像来开发有效的模型。

结果

开发了一种用于对 COVID-19 的胸部 CT 图像进行阳性或阴性分类的卷积神经网络(CNN)集成模型。为了对 COVID-19 患者获得的胸部 CT 图像进行分类,所提出的 COVID19-CNN 集成模型结合使用了多个经过训练的 CNN 模型和多数投票策略。通过从著名的预训练 CNN 模型进行迁移学习并适当应用其算法超参数,对 CNN 模型进行了训练,以对胸部 CT 图像进行分类。通过均匀实验设计确定了预训练 CNN 模型的算法超参数组合。用于训练和性能测试 COVID19-CNN 集成模型的胸部 CT 图像(来自 COVID-19 患者的 405 张和来自健康患者的 397 张)是 2020 年 Hu 的早期研究中获得的。实验表明,COVID19-CNN 集成模型在将 CT 图像分类为 COVID-19 阳性或阴性方面的准确率达到 96.7%,优于单个经过训练的 CNN 模型的准确率。COVID19-CNN 集成模型获得的其他性能指标(即精度、召回率、特异性和 F 分数)均高于单个经过训练的 CNN 模型。

结论

COVID19-CNN 集成模型在对 COVID-19 的胸部 CT 图像进行阳性或阴性分类方面具有较高的准确性和出色的能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3d2/8576959/d3b766049c9c/12859_2021_4083_Fig1_HTML.jpg

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