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作为潜在抗乳腺癌药物的乔伊西植物成分的计算机筛选、ADMET分析和计算模拟研究:对这一被忽视植物的批判性评估

In silico screening, ADMET analysis and computational simulation studies on Choisy phytoconstituents as prospective antibreast cancer agents: a critical appraisal of the neglected plant.

作者信息

Kushwaha Pooja, Mehrotra Sudhir, Ahmad Rumana

机构信息

Department of Biochemistry, University of Lucknow, Lucknow, UP India.

Department of Biochemistry, Era's Lucknow Medical College & Hospital, Era University, Sarfarazganj, Hardoi Road, Lucknow, UP 226003 India.

出版信息

3 Biotech. 2025 Jul;15(7):201. doi: 10.1007/s13205-025-04365-8. Epub 2025 Jun 4.

Abstract

This study employed in silico methods to evaluate the antibreast cancer potential of three phytocomponents from  garcinol, anthocyanin, and hydroxycitric acid against nine breast cancer-related protein targets. Molecular docking revealed that garcinol exhibited the strongest binding affinity for BRCA2 (BE - 7.1 kcal/mol, Kd 6.27 µM), anthocyanin for BAX (BE - 7.54 kcal/mol, Kd 2.96 µM) and hydroxycitric acid for BRCA1 (BE - 8.28 kcal/mol, Kd 848.46 nM), outperforming reference drugs doxorubicin and tetracycline. Molecular dynamics simulation of the garcinol-BRCA2 complex demonstrated conformational stability throughout the 100 ns simulation period, supported by consistent RMSD, hydrogen bond count, and compactness metrics (Rg ≈ 1.94-2.0 nm). ADMET and toxicity analyses confirmed favorable drug likeness and non-toxic profiles for the GI phytocomponents. PASS prediction, BOILED-Egg and bioavailability radar assessments further supported their potential as orally bioavailable, CNS-accessible therapeutic candidates. The findings indicate that the relatively unexplored GI possesses a high concentration of pharmacologically active compounds and may serve as an excellent source of novel, natural anticancer agents for future drug development. To the best of our knowledge, this is the first in silico study evaluating the antibreast cancer potential of phytocompounds.

摘要

本研究采用计算机模拟方法,评估了藤黄酚、花青素和羟基柠檬酸这三种植物成分对九个乳腺癌相关蛋白靶点的抗乳腺癌潜力。分子对接显示,藤黄酚对BRCA2表现出最强的结合亲和力(结合能-7.1千卡/摩尔,解离常数6.27微摩尔),花青素对BAX(结合能-7.54千卡/摩尔,解离常数2.96微摩尔),羟基柠檬酸对BRCA1(结合能-8.28千卡/摩尔,解离常数848.46纳摩尔),优于参考药物阿霉素和四环素。藤黄酚-BRCA2复合物的分子动力学模拟表明,在整个100纳秒的模拟周期内构象稳定,均方根偏差、氢键数量和紧密性指标(回旋半径≈1.94-2.0纳米)一致支持这一结果。ADMET和毒性分析证实了胃肠道植物成分具有良好的药物相似性和无毒特性。PASS预测、水煮蛋模型和生物利用度雷达评估进一步支持了它们作为口服生物可利用、可进入中枢神经系统的治疗候选物的潜力。研究结果表明,相对未被充分探索的胃肠道含有高浓度的药理活性化合物,可能成为未来药物开发中新型天然抗癌药物的优秀来源。据我们所知,这是第一项评估植物化合物抗乳腺癌潜力的计算机模拟研究。

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