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探索脓毒症相关性急性肾损伤中乳酰化相关生物学功能及免疫调节的分子机制。

Exploring the molecular mechanisms of lactylation-related biological functions and immune regulation in sepsis-associated acute kidney injury.

作者信息

Jiang Kui, Mai Shujuan, Li Jian, Zhou Hongxing, Chen Yu, Zou Leyuan, Yu Huixia

机构信息

Department of Nephrology, The First Affiliated Hospital of Jinan University, Guangzhou, Guangdong Province, China.

Intensive Care Unit, The First Affiliated Hospital of Jinan University, Guangzhou, Guangdong Province, China.

出版信息

Clin Exp Med. 2025 Jun 12;25(1):200. doi: 10.1007/s10238-025-01745-5.

Abstract

Lactylation, a novel post-translational modification, has been implicated in various pathophysiological processes; however, its role in sepsis-associated acute kidney injury (SA-AKI) remains unclear. This study aimed to investigate the expression patterns and potential functional roles of lactylation-related genes (LRGs) in SA-AKI using transcriptomic data from the GSE232404 dataset. A total of 118 differentially expressed LRGs were identified, enriched in pathways related to RNA splicing, histone deacetylation, and carbon metabolism pathways. Immune infiltration analysis revealed significant alterations in macrophages M0, neutrophils, and T cell subtypes. Consensus clustering-based molecular subtyping stratified SA-AKI samples into two distinct clusters, each characterized by unique immune landscapes and enrichment in cytokine signaling pathways. Weighted gene co-expression network analysis (WGCNA) identified the darkseagreen3 module as highly correlated with these subtypes. Subsequent machine learning analyses, incorporating Lasso regression and random forest algorithms, identified PECR and TP53I3 as key LRGs. Transcription factor enrichment analysis further suggested motif cisbp__M1413 as a potential upstream regulator. Single-cell RNA sequencing (scRNA-seq) analysis revealed PECR and TP53I3 were predominant expression in proximal tubule and Loop of Henle cells, with significant correlations to lactylation-related pathways. This comprehensive analysis finds the potential roles of LRGs in SA-AKI pathogenesis, particularly their association with immune regulation and cell-type specificity. The identified of PECR and TP53I3 provides new insights into the molecular mechanisms of SA-AKI and may inform the development of targeted therapeutic strategies.

摘要

乳酰化是一种新型的翻译后修饰,已被证明参与多种病理生理过程;然而,其在脓毒症相关性急性肾损伤(SA-AKI)中的作用仍不清楚。本研究旨在利用GSE232404数据集的转录组数据,研究SA-AKI中乳酰化相关基因(LRGs)的表达模式及其潜在功能作用。共鉴定出118个差异表达的LRGs,这些基因富集于与RNA剪接、组蛋白去乙酰化和碳代谢途径相关的通路。免疫浸润分析显示,巨噬细胞M0、中性粒细胞和T细胞亚群存在显著变化。基于一致性聚类的分子分型将SA-AKI样本分为两个不同的簇,每个簇具有独特的免疫格局,并在细胞因子信号通路中富集。加权基因共表达网络分析(WGCNA)确定暗海绿色3模块与这些亚型高度相关。随后的机器学习分析结合套索回归和随机森林算法,确定PECR和TP53I3为关键的LRGs。转录因子富集分析进一步表明基序cisbp__M1413是一个潜在的上游调节因子。单细胞RNA测序(scRNA-seq)分析显示,PECR和TP53I3在近端小管和髓袢细胞中表达占主导地位,与乳酰化相关途径显著相关。这项综合分析发现了LRGs在SA-AKI发病机制中的潜在作用,特别是它们与免疫调节和细胞类型特异性的关联。PECR和TP53I3的鉴定为SA-AKI的分子机制提供了新的见解,并可能为靶向治疗策略的开发提供依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc4d/12162736/3d479d92b956/10238_2025_1745_Fig1_HTML.jpg

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