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两种噬菌体的特性鉴定与基因组分析

Characterization and genomic analysis of two phages.

作者信息

Jiang Li Ling, Liu Chang, Liu Guang Feng, Tao Xiu Hua, Zhang Hong Sai, Zhang Yue, Chen Yuyu, Li Meng Yao, Jiang Jing Zhe, Chen Hong Peng

机构信息

School of Traditional Chinese Medicine, Guangdong Pharmaceutical University, Guangzhou, Guangdong, China.

Key Laboratory of South China Sea Fishery Resources Exploitation and Utilization, Ministry of Agriculture and Rural Affairs, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou, Guangdong, China.

出版信息

Front Microbiol. 2025 Jun 9;16:1585026. doi: 10.3389/fmicb.2025.1585026. eCollection 2025.

Abstract

Phages, as viruses that specifically infect certain bacteria, have great research value in the prevention and control of bacterial diseases. Bacteria of the genus are widely distributed in aquatic environments and are important zoonotic pathogens that can cause a variety of diseases. In this study, two virulent phages, AhC3_1 and AsC4_1, were successfully isolated using bacteria from the genus . The evolutionary relationships of the two phages were analyzed using methods such as phylogenetic analysis and average amino acid identity (AAI) analysis, and their biological characteristics were assessed through approaches including one-step growth curve assay and temperature tolerance testing. The results showed that the genome sequences of phages C3 and C4 were 232,884 bp and 45,983 bp in length, respectively, with G + C contents of 44.36% and 50.11%. Both belong to double-stranded circular DNA viruses. Phages C3 and C4 have been classified within two novel viral genera, provisionally designated as "Aynavirus" and "Asnavirus," respectively. Additionally, both C3 and C4 exhibited good stability in different temperature and pH conditions. The latent period of C3 was 10 min, with a burst size of 32 PFU.cell. The in vitro antibacterial curve showed that when the multiplicity of infection (MOI) was 10, C3 could exert a strong inhibitory effect on hydrophila for up to 10 h. The latent period of C4 was less than 10 min, with a burst size of 1,250 PFU.cell. At an MOI of 10, C4 could exert a strong inhibitory effect on salmonicida for up to 15 h. In summary, the two phages isolated in this study have the potential to serve as potential therapeutic agents for aquaculture diseases and provide valuable data for research on antibacterial infections.

摘要

噬菌体作为专门感染某些细菌的病毒,在细菌性疾病的防控方面具有巨大的研究价值。 属细菌广泛分布于水生环境中,是重要的人畜共患病原体,可引发多种疾病。 在本研究中,利用 属细菌成功分离出两种烈性噬菌体AhC3_1和AsC4_1。 采用系统发育分析和平均氨基酸同一性(AAI)分析等方法分析了这两种噬菌体的进化关系,并通过一步生长曲线测定和温度耐受性测试等方法评估了它们的生物学特性。 结果表明,噬菌体C3和C4的基因组序列长度分别为232,884 bp和45,983 bp,G + C含量分别为44.36%和50.11%。 两者均属于双链环状DNA病毒。 噬菌体C3和C4已被归类到两个新的病毒属中,暂定为“Aynavirus”和“Asnavirus”。 此外,C3和C4在不同温度和pH条件下均表现出良好的稳定性。 C3的潜伏期为10分钟,裂解量为32 PFU/细胞。 体外抗菌曲线表明,当感染复数(MOI)为10时,C3对嗜水气单胞菌可产生长达10小时的强烈抑制作用。 C4的潜伏期小于10分钟,裂解量为1250 PFU/细胞。 在MOI为10时,C4对杀鲑气单胞菌可产生长达15小时的强烈抑制作用。 综上所述,本研究分离出的两种噬菌体有潜力作为水产养殖疾病的潜在治疗剂,并为抗菌感染研究提供有价值的数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c15/12184794/5a7b67bab33a/fmicb-16-1585026-g001.jpg

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