Demir Ğarip, Valjakka Jarkko, Turunen Ossi, Yildirim Deniz, Binay Barış
Department of Molecular Biology and Genetics, Gebze Technical University, 41400 Gebze, Kocaeli, Türkiye.
Faculty of Medicine and Health Technology, Tampere University, FI-33100 Tampere, Finland.
Int J Biol Macromol. 2025 Aug;319(Pt 4):145507. doi: 10.1016/j.ijbiomac.2025.145507. Epub 2025 Jul 1.
Non-proteinogenic amino acids are valuable compounds for pharmaceutical and chemical applications. When enzymatic synthesis offers a sustainable and enantioselective alternative to chemical methods, the reductive amination potential of L-alanine dehydrogenases has been investigated for activity on larger keto acids. This study presents the first report on the engineering of Thermus thermophilus L-alanine dehydrogenase (TtAlaDH) to enhance its reductive amination activity for α-ketovalerate and α-ketocaproate, broadening its substrate scope beyond its natural pyruvate preference. Using active-site redesigning technique, the Tyr92 residue of TtAlaDH was targeted, and Tyr92Ser mutant with significantly improved activity was generated. Kinetic analysis demonstrated 198-fold increase in k and 30-fold rise in K for α-ketocaproate, resulting in 6.6-fold enhancement in catalytic efficiency (k/K). Similarly, for α-ketovalerate, k/K increased 1.7-fold. The activity for smaller substrates such as α-ketobutyrate and pyruvate declined. Molecular modeling revealed that the Tyr92Ser mutation remodeled the active site enabling enhanced reductive amination. This is the first study demonstrating the successful synthesis of L-2-aminobutyrate, L-norvaline, and L-norleucine via enzymatic reductive amination using an engineered L-AlaDH, achieving conversion 43 %, 47 %, and 70 % yields, respectively, with >99 % enantiopurity. This work establishes a novel biocatalytic approach for the green synthesis of valuable L-alanine derivatives, highlighting its industrial potential.