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嗜热葡糖苷芽孢杆菌的工程工具箱

The engineering toolbox of Parageobacillus thermoglucosidasius.

作者信息

Millgaard Marie, Escher Belinda, Pogrebnyakov Ivan, Nielsen Alex Toftgaard

机构信息

The Novo Nordisk Foundation Center for Biosustainability, Building 220, Kemitorvet, 2800 Kgs, Lyngby, Denmark.

出版信息

Appl Microbiol Biotechnol. 2025 Jul 9;109(1):163. doi: 10.1007/s00253-025-13508-z.

Abstract

The thermophilic bacterium Parageobacillus thermoglucosidasius is considered a promising host for industrial microbial production. However, its genetic engineering toolbox is still under development. The focus of this review is to provide an organised summary of the currently available resources to facilitate the use of this organism. The article offers a comprehensive overview of regulatory parts used for the construction of genetic circuits and plasmids, including promoters, ribosome binding sites, terminators, antibiotic resistance genes, reporter genes, and other genetic elements of interest. Additionally, it examines the developments in P. thermoglucosidasius vector designs over the years. Here, vectors were categorised either as replicative vectors intended for gene expression, or integrative vectors intended for genomic engineering. The functionality of each vector was described, and their contributions to the progress of molecular tools available for P. thermoglucosidasius were evaluated. The review also summarises recent advancements in CRISPR-based systems relevant to this organism. Finally, this review discusses potential improvements that could further contribute to the expanding engineering toolbox of P. thermoglucosidasius, paving the way for more advanced applications. KEY POINTS: • The existing engineering toolbox for P. thermoglucosidasius contributes to the growing interest in using it as a thermophilic production host. • The engineering toolbox for P. thermoglucosidasius has expansion potential in genetic circuit parts and CRISPR-based tools. • Thermophilic hosts like P. thermoglucosidasius are in need of more thermostable reporter genes and thermostable selection markers.

摘要

嗜热细菌嗜热栖热放线菌被认为是工业微生物生产中有前景的宿主。然而,其基因工程工具箱仍在开发中。本综述的重点是对当前可用资源进行有条理的总结,以促进该生物体的利用。本文全面概述了用于构建遗传电路和质粒的调控元件,包括启动子、核糖体结合位点、终止子、抗生素抗性基因、报告基因以及其他感兴趣的遗传元件。此外,还考察了多年来嗜热栖热放线菌载体设计的发展情况。在这里,载体被分类为用于基因表达的复制型载体或用于基因组工程的整合型载体。描述了每种载体的功能,并评估了它们对嗜热栖热放线菌可用分子工具进展的贡献。该综述还总结了与该生物体相关的基于CRISPR系统的最新进展。最后,本综述讨论了可能的改进措施,这些措施可进一步促进嗜热栖热放线菌工程工具箱的扩展,为更先进的应用铺平道路。要点:• 嗜热栖热放线菌现有的工程工具箱促使人们越来越有兴趣将其用作嗜热生产宿主。• 嗜热栖热放线菌的工程工具箱在遗传电路元件和基于CRISPR的工具方面具有扩展潜力。• 像嗜热栖热放线菌这样的嗜热宿主需要更耐热的报告基因和耐热选择标记。

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