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本文引用的文献

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Genome sequence of the marine alphaproteobacterium sp. EG35 isolated from the temperate octocoral .从温带八放珊瑚中分离出的海洋α-变形菌EG35的基因组序列
Microbiol Resour Announc. 2024 Nov 12;13(11):e0087224. doi: 10.1128/mra.00872-24. Epub 2024 Oct 24.
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sp. nov. and sp. nov., isolated from tidal flats in the Yellow Sea in Korea.新种和新种，从韩国黄海的潮滩分离得到。
Int J Syst Evol Microbiol. 2023 Mar;73(3). doi: 10.1099/ijsem.0.005794.
3
Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome.宏基因组学解析基因组学为八放珊瑚微生物组中的几丁质周转、代谢特化和生态位分隔提供了新的见解。
Microbiome. 2022 Sep 22;10(1):151. doi: 10.1186/s40168-022-01343-7.
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Insights into the Cultured Bacterial Fraction of Corals.对珊瑚培养细菌组分的见解。
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Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals.对八放珊瑚中细菌群落的分类学、功能和失调的宏基因组学研究
Microbiome. 2021 Mar 25;9(1):72. doi: 10.1186/s40168-021-01031-y.
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GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database.GTDB-Tk：一个使用基因组分类数据库对基因组进行分类的工具包。
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High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries.高通量 ANI 分析 9 万余组原核基因组揭示了清晰的物种界限。
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KBase: The United States Department of Energy Systems Biology Knowledgebase.KBase：美国能源部系统生物学知识库。
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The gorgonian coral Eunicella labiata hosts a distinct prokaryotic consortium amenable to cultivation.柳珊瑚Eunicella labiata拥有一个适合培养的独特原核生物群落。
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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
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从八放珊瑚中分离出的海洋细菌EG26的基因组序列表明其具有与宿主相关的生活方式的倾向。

Genome sequence of the marine bacterium sp. EG26, isolated from the octocoral , suggests aptitude for a host-associated lifestyle.

作者信息

Keller-Costa Tina, Madureira Selene, Fernandes Ana S, Kozma Lydia, Gonçalves Jorge, Barroso Cristina, Kusuma Ali Budhi, Egas Conceição, Costa Rodrigo

机构信息

Institute for Bioengineering and Biosciences (IBB) and Institute for Health and Bioeconomy (i4HB), Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.

Department of Bioengineering, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal.

出版信息

Microbiol Resour Announc. 2025 Aug 14;14(8):e0043025. doi: 10.1128/mra.00430-25. Epub 2025 Jul 14.

DOI:10.1128/mra.00430-25
PMID:40657902
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12352049/
Abstract

We present the genome sequence of the octocoral-associated sp. EG26. We highlight features related to type II, III, IV, and VI secretion systems, ankyrin-repeat proteins, and taurine degradation, suggesting a preference for a host-associated lifestyle. Strain EG26 also possesses genes for the degradation of phenolic compounds with bioremediation potential.

摘要

我们展示了与八放珊瑚相关的sp. EG26的基因组序列。我们着重介绍了与II型、III型、IV型和VI型分泌系统、锚蛋白重复蛋白以及牛磺酸降解相关的特征，这表明它倾向于与宿主相关的生活方式。EG26菌株还拥有具有生物修复潜力的酚类化合物降解基因。