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预测美国莱姆病风险:一种整合环境、社会经济和病媒因素的机器学习方法。

Projecting lyme disease risk in the United States: A machine learning approach integrating environmental, socioeconomic and vector factors.

作者信息

Sun Yan-Qun, Zhu Xiao-Yan, Fan Tian-Ci, Ma Tian, Ge Hong-Han, Shi Rui-Fang, Wang Xu, Li Wei, Yin Jie-Yun, Tian Ye

机构信息

Children's Hospital of Nanjing Medical University, Nanjing, China.

Suzhou Municipal Center for Disease Control and Prevention, Suzhou, China.

出版信息

One Health. 2025 Jun 13;21:101111. doi: 10.1016/j.onehlt.2025.101111. eCollection 2025 Dec.

DOI:10.1016/j.onehlt.2025.101111
PMID:40673113
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12266540/
Abstract

OBJECTIVE

Lyme disease, caused by and transmitted by blacklegged ticks ( species), is the most common vector-borne disease in the United States. Its spatiotemporal dynamics are influenced by environmental and socioeconomic factors, yet the impacts of the COVID-19 pandemic on Lyme disease remain unclear.

METHODS

We analyzed county-level Lyme disease surveillance data (2001-2022) alongside environmental, socioeconomic, and tick vector data. Using machine learning models (Random Forest, Boosted Regression Trees, and XGBoost) and Shapley Additive Explanations (SHAP), we evaluated the influence of key predictors on Lyme disease risk. Predicted cases for 2020-2022 were compared with actual reports to assess the pandemic's effects.

RESULTS

Lyme disease cases rose from 16,862 in 2001 to 61,802 in 2022, with geographic expansion into southeastern regions. Population density, ecological niche of , and maximum temperature were presented as the key predictors of disease risk. The COVID-19 pandemic severely disrupted reporting dynamics, with 2020 and 2021 cases falling 43.9 % (95 % CI: 41.2-46.7 %) and 22.0 % (95 % CI: 19.5-24.5 %) below predictions, respectively-a decline most pronounced in the Northeast and linked to reduced healthcare access and outdoor activity during lockdowns.

CONCLUSION

Our findings highlight the complex interactions of environmental, socioeconomic, and behavioral factors in Lyme disease dynamics, including the significant impact of the COVID-19 pandemic on disease reporting. These insights underscore the need for integrated, data-driven public health strategies to mitigate Lyme disease risk in the United States.

摘要

目的

莱姆病由黑腿蜱( 物种)引起并通过其传播,是美国最常见的媒介传播疾病。其时空动态受环境和社会经济因素影响,但新冠疫情对莱姆病的影响仍不明确。

方法

我们分析了县级莱姆病监测数据(2001 - 2022年)以及环境、社会经济和蜱虫媒介数据。使用机器学习模型(随机森林、增强回归树和XGBoost)和夏普利值附加解释(SHAP),我们评估了关键预测因素对莱姆病风险的影响。将2020 - 2022年的预测病例与实际报告进行比较,以评估疫情的影响。

结果

莱姆病病例从2001年的16,862例增至2022年的61,802例,地理范围扩展到东南部地区。人口密度、 的生态位和最高温度是疾病风险的关键预测因素。新冠疫情严重扰乱了报告动态,2020年和2021年的病例分别比预测低43.9%(95%置信区间:41.2 - 46.7%)和22.0%(95%置信区间:19.5 - 24.5%)——这种下降在东北部最为明显,且与封锁期间医疗服务可及性降低和户外活动减少有关。

结论

我们的研究结果突出了环境、社会经济和行为因素在莱姆病动态中的复杂相互作用,包括新冠疫情对疾病报告的重大影响。这些见解强调了需要综合的、数据驱动的公共卫生策略来降低美国的莱姆病风险。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/5fe9578e1caf/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/9a68120900e9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/4a2dce7c8e1d/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/5b8a3cda295d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/540e49ff9b13/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/5fe9578e1caf/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/9a68120900e9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/4a2dce7c8e1d/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/5b8a3cda295d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/540e49ff9b13/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a11/12266540/5fe9578e1caf/gr5.jpg

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本文引用的文献

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Lyme Disease Surveillance and Epidemiology in the United States: A Historical Perspective.美国莱姆病监测与流行病学:历史透视。
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Mapping and Habitat Suitability Under Current and Mid-Century Climate in the Pacific Northwest (BC and WA).太平洋西北地区(不列颠哥伦比亚省和华盛顿州)当前及本世纪中叶气候条件下的测绘与栖息地适宜性
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Complex heatmap visualization.复杂热图可视化。
Imeta. 2022 Aug 1;1(3):e43. doi: 10.1002/imt2.43. eCollection 2022 Sep.
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Estimating the Incidence and Economic Cost of Lyme Disease Cases in Canada in the 21st Century with Projected Climate Change.在预测气候变化的情况下,估算 21 世纪加拿大莱姆病病例的发病率和经济成本。
Environ Health Perspect. 2024 Feb;132(2):27005. doi: 10.1289/EHP13759. Epub 2024 Feb 13.
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The association between the incidence of Lyme disease in the USA and indicators of greenness and land cover.美国莱姆病发病率与绿化程度及土地覆盖指标之间的关联。
Curr Res Parasitol Vector Borne Dis. 2023 Jul 7;4:100132. doi: 10.1016/j.crpvbd.2023.100132. eCollection 2023.
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The human-infection potential of emerging tick-borne viruses is a global public health concern.新出现的蜱传病毒对人类的感染潜力是一个全球公共卫生问题。
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Estimating the Frequency of Lyme Disease Diagnoses, United States, 2010-2018.估计 2010-2018 年美国莱姆病诊断的频率。
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Landscape features predict the current and forecast the future geographic spread of Lyme disease.景观特征可预测莱姆病的当前和未来的地理分布。
Proc Biol Sci. 2020 Dec 23;287(1941):20202278. doi: 10.1098/rspb.2020.2278.
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Impact of prior and projected climate change on US Lyme disease incidence.气候变化对美国莱姆病发病率的影响:过去与未来的比较。
Glob Chang Biol. 2021 Feb;27(4):738-754. doi: 10.1111/gcb.15435. Epub 2020 Nov 22.