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基于正交多任务典型相关分析的阿尔茨海默病生物标志物探索。

Exploration of biomarkers of Alzheimer's disease based on orthogonal multi-task canonical correlation analysis.

作者信息

Yang Tao, Wan GuangYu, Zhou Xiong

机构信息

Department of Radiology, Xianning Central Hospital, No. 228 Jingui Road, Xianning, China.

出版信息

BMC Med Imaging. 2025 Jul 17;25(1):287. doi: 10.1186/s12880-025-01782-2.

DOI:10.1186/s12880-025-01782-2
PMID:40676546
Abstract

As a neurodegenerative disease, Alzheimer's disease (AD) has many symptoms, such as memory impairment, cognitive decline, and personality change. Image genetics is the correlation analysis between imageology and genetics, and image genetics research can effectively detect the biomarkers of AD. This paper proposed an orthogonal multi-task sparse canonical correlation analysis (MTOSCCA) algorithm. Based on the multi-task canonical correlation analysis, this algorithm added orthogonal constraints to the weight vectors U and V, which can effectively prevent the influence of redundant features on the results. In this paper, the MTOSCCA algorithm was applied to structural magnetic resonance imaging, single nucleotide polymorphism, and gene expression data integration. The results showed that the proposed algorithm has better correlation performance, and the obtained markers have diagnostic significance for AD and mild cognitive impairment (MCI).

摘要

作为一种神经退行性疾病,阿尔茨海默病(AD)有许多症状,如记忆障碍、认知衰退和性格改变。影像遗传学是影像学与遗传学之间的相关性分析,影像遗传学研究可以有效地检测出AD的生物标志物。本文提出了一种正交多任务稀疏典型相关分析(MTOSCCA)算法。该算法在多任务典型相关分析的基础上,对权重向量U和V添加了正交约束,能够有效防止冗余特征对结果的影响。本文将MTOSCCA算法应用于结构磁共振成像、单核苷酸多态性和基因表达数据整合。结果表明,所提算法具有更好的相关性性能,所获得的标志物对AD和轻度认知障碍(MCI)具有诊断意义。

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本文引用的文献

1
Disrupted topological organization of functional brain networks in Alzheimer's disease patients with depressive symptoms.阿尔茨海默病伴抑郁症状患者的功能脑网络拓扑组织紊乱。
BMC Psychiatry. 2022 Dec 20;22(1):810. doi: 10.1186/s12888-022-04450-9.
2
Astrocytic urea cycle detoxifies Aβ-derived ammonia while impairing memory in Alzheimer's disease.星形胶质细胞尿素循环可解毒由β-淀粉样蛋白衍生的氨,同时损害阿尔茨海默病患者的记忆力。
Cell Metab. 2022 Aug 2;34(8):1104-1120.e8. doi: 10.1016/j.cmet.2022.05.011. Epub 2022 Jun 22.
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Regulation of the Late Onset alzheimer's Disease Associated Expression.
调控迟发性阿尔茨海默病相关表达。
Am J Alzheimers Dis Other Demen. 2022 Jan-Dec;37:15333175221085066. doi: 10.1177/15333175221085066.
4
Differences Changes in Cerebellar Functional Connectivity Between Mild Cognitive Impairment and Alzheimer's Disease: A Seed-Based Approach.轻度认知障碍与阿尔茨海默病之间小脑功能连接的差异变化:基于种子点的方法。
Front Neurol. 2021 Jun 17;12:645171. doi: 10.3389/fneur.2021.645171. eCollection 2021.
5
An epoxide hydrolase inhibitor reduces neuroinflammation in a mouse model of Alzheimer's disease.一种环氧水解酶抑制剂可减轻阿尔茨海默病小鼠模型中的神经炎症。
Sci Transl Med. 2020 Dec 9;12(573). doi: 10.1126/scitranslmed.abb1206.
6
TREM2 ameliorates neuroinflammatory response and cognitive impairment via PI3K/AKT/FoxO3a signaling pathway in Alzheimer's disease mice.TREM2 通过 PI3K/AKT/FoxO3a 信号通路改善阿尔茨海默病小鼠的神经炎症反应和认知障碍。
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7
Identifying diagnosis-specific genotype-phenotype associations via joint multitask sparse canonical correlation analysis and classification.通过联合多任务稀疏典型相关分析和分类识别诊断特异性基因型-表型关联。
Bioinformatics. 2020 Jul 1;36(Suppl_1):i371-i379. doi: 10.1093/bioinformatics/btaa434.
8
Multi-Task Sparse Canonical Correlation Analysis with Application to Multi-Modal Brain Imaging Genetics.多任务稀疏典型相关分析及其在多模态脑影像遗传学中的应用。
IEEE/ACM Trans Comput Biol Bioinform. 2021 Jan-Feb;18(1):227-239. doi: 10.1109/TCBB.2019.2947428. Epub 2021 Feb 3.
9
Enhancer variants associated with Alzheimer's disease affect gene expression via chromatin looping.与阿尔茨海默病相关的增强子变异通过染色质环影响基因表达。
BMC Med Genomics. 2019 Sep 9;12(1):128. doi: 10.1186/s12920-019-0574-8.
10
[The correlation of functional connectivity and structural connectivity between hippocampus and thalamus in Alzheimer's disease and amnestic mild cognitive impairment].[阿尔茨海默病及遗忘型轻度认知障碍中海马体与丘脑之间功能连接和结构连接的相关性]
Zhonghua Nei Ke Za Zhi. 2019 Sep 1;58(9):662-667. doi: 10.3760/cma.j.issn.0578-1426.2019.09.006.