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通过乙酰化和聚(ADP-核糖)化调节核小体核心颗粒中组蛋白尾巴的静电势。

Modulation of histone tail electrostatic potentials in nucleosome core particles by acetylation and PARylation.

作者信息

Bolik-Coulon Nicolas, Rößler Philip, Nosella Michael L, Kim Tae Hun, Kay Lewis E

机构信息

Department of Molecular Genetics, University of Toronto, Toronto M5S 1A8, ON, Canada.

Department of Chemistry, University of Toronto, Toronto M5S 3H6, ON, Canada.

出版信息

Proc Natl Acad Sci U S A. 2025 Jul 29;122(30):e2511507122. doi: 10.1073/pnas.2511507122. Epub 2025 Jul 21.

Abstract

Cellular DNA is wrapped about an octamer composed of four histone proteins forming the fundamental unit of chromatin structure, the nucleosome core particle (NCP). The intrinsically disordered tails of the histones serve as scaffolds for binding an array of proteins that regulate the fidelity of the genome and gene expression. A variety of posttranslational modifications (PTMs) on the tails have been characterized, including some that alter their overall charge; however, per-residue changes in tail electrostatic potentials for different PTMs have not been reported. Here, using a solution NMR approach in which enhancements of transverse relaxation rates of tail amide and methyl group protons are quantified through the addition of paramagnetic cosolutes, we examine how acetylation and PARylation modulate histone tail electrostatic potentials. Notably, even though both PTMs decrease the net positive charge carried by each tail, their electrostatic potentials either increase or decrease in a tail-specific manner relative to an unmodified NCP. A simple model of tail-DNA interactions is presented to explain these results.

摘要

细胞DNA缠绕在由四种组蛋白组成的八聚体周围,形成染色质结构的基本单位——核小体核心颗粒(NCP)。组蛋白内在无序的尾部作为支架,用于结合一系列调节基因组保真度和基因表达的蛋白质。已对尾部的多种翻译后修饰(PTM)进行了表征,包括一些改变其整体电荷的修饰;然而,尚未报道不同PTM下尾部静电势的每个残基变化。在这里,我们使用一种溶液核磁共振方法,通过添加顺磁共溶质来量化尾部酰胺和甲基质子横向弛豫率的增强,研究乙酰化和聚(ADP-核糖)化如何调节组蛋白尾部静电势。值得注意的是,尽管这两种PTM都降低了每条尾部携带的净正电荷,但相对于未修饰的NCP,它们的静电势以尾部特异性方式增加或降低。本文提出了一个尾部与DNA相互作用的简单模型来解释这些结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c105/12318224/2feee16a679c/pnas.2511507122fig01.jpg

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