Suppr超能文献

体温下二醋酸二铑与溶菌酶的结合

Dirhodium Tetraacetate Binding to Lysozyme at Body Temperature.

作者信息

Tito Gabriella, Ferraro Giarita, Merlino Antonello

机构信息

Department of Chemical Sciences, University of Naples Federico II, 80126 Naples, Italy.

出版信息

Int J Mol Sci. 2025 Jul 9;26(14):6582. doi: 10.3390/ijms26146582.

Abstract

Paddlewheel dirhodium complexes are cytotoxic compounds that are also used as catalysts and in the formation of Rh-based artificial metalloenzymes. Low-temperature structures of adducts formed by the model protein hen egg white lysozyme (HEWL) with dirhodium tetraacetate ([Rh(μ-OCCH)]) when crystals of the protein were treated with the metal compound at 20 °C demonstrated that [Rh(μ-OCCH)] in part breaks down upon reaction with HEWL; dimeric Rh-Rh units bind the side chains of Asp18 and the C-terminal carboxylate, and monometallic fragments coordinate the side chains of Arg14 and His15 in 20% ethylene glycol, 0.100 M sodium acetate at pH 4.5 and 0.600 M sodium nitrate, while dimeric Rh-Rh units bind the side chains of Asn93 and Lys96, the C-terminal carboxylate and Asp101, with monometallic fragments that bind the side chains of Lys33 and His15 in 0.010 M HEPES pH 7.5 and 2.00 M sodium formate. To verify whether the binding of this metallodrug to proteins also occurs at body temperature, crystals of HEWL were grown in 0.010 M HEPES pH 7.5 and 2.00 M sodium formate at 37 °C and soaked with [Rh(μ-OCCH)] at the same temperature. X-ray diffraction data collected on these crystals at 37 °C demonstrate that [Rh(μ-OCCH)] reacts with proteins at body temperature. The structures of the Rh/HEWL adduct formed at 20 °C (obtained from data collected at 100 K) and at 37 °C under the same experimental conditions are very similar, with metal binding sites that are conserved. However, metal-containing fragment occupancy is higher in the structure obtained at 37 °C, suggesting a role of temperature in defining the protein metalation process.

摘要

桨轮二铑配合物是细胞毒性化合物,也用作催化剂和用于形成基于铑的人工金属酶。当在20℃用金属化合物处理蛋白质晶体时,模型蛋白鸡蛋清溶菌酶(HEWL)与四乙酸二铑([Rh(μ - OCCH)])形成的加合物的低温结构表明,[Rh(μ - OCCH)]与HEWL反应时部分分解;在pH 4.5的20%乙二醇、0.100 M乙酸钠和0.600 M硝酸钠中,二聚体Rh - Rh单元结合Asp18的侧链和C末端羧酸盐,单金属片段配位Arg14和His15的侧链,而在0.010 M HEPES pH 7.5和2.00 M甲酸钠中,二聚体Rh - Rh单元结合Asn93和Lys96的侧链、C末端羧酸盐和Asp101,单金属片段结合Lys33和His15的侧链。为了验证这种金属药物与蛋白质的结合在体温下是否也会发生,在37℃于0.010 M HEPES pH 7.5和2.00 M甲酸钠中培养HEWL晶体,并在相同温度下用[Rh(μ - OCCH)]浸泡。在37℃对这些晶体收集的X射线衍射数据表明,[Rh(μ - OCCH)]在体温下与蛋白质反应。在相同实验条件下,20℃(从100 K收集的数据获得)和37℃形成的Rh/HEWL加合物的结构非常相似,金属结合位点是保守的。然而,在37℃获得的结构中含金属片段占有率更高,表明温度在确定蛋白质金属化过程中起作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e78f/12294737/2f07731da4ea/ijms-26-06582-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验