Tito Gabriella, Ferraro Giarita, Merlino Antonello
Department of Chemical Sciences, University of Naples Federico II, 80126 Naples, Italy.
Int J Mol Sci. 2025 Jul 9;26(14):6582. doi: 10.3390/ijms26146582.
Paddlewheel dirhodium complexes are cytotoxic compounds that are also used as catalysts and in the formation of Rh-based artificial metalloenzymes. Low-temperature structures of adducts formed by the model protein hen egg white lysozyme (HEWL) with dirhodium tetraacetate ([Rh(μ-OCCH)]) when crystals of the protein were treated with the metal compound at 20 °C demonstrated that [Rh(μ-OCCH)] in part breaks down upon reaction with HEWL; dimeric Rh-Rh units bind the side chains of Asp18 and the C-terminal carboxylate, and monometallic fragments coordinate the side chains of Arg14 and His15 in 20% ethylene glycol, 0.100 M sodium acetate at pH 4.5 and 0.600 M sodium nitrate, while dimeric Rh-Rh units bind the side chains of Asn93 and Lys96, the C-terminal carboxylate and Asp101, with monometallic fragments that bind the side chains of Lys33 and His15 in 0.010 M HEPES pH 7.5 and 2.00 M sodium formate. To verify whether the binding of this metallodrug to proteins also occurs at body temperature, crystals of HEWL were grown in 0.010 M HEPES pH 7.5 and 2.00 M sodium formate at 37 °C and soaked with [Rh(μ-OCCH)] at the same temperature. X-ray diffraction data collected on these crystals at 37 °C demonstrate that [Rh(μ-OCCH)] reacts with proteins at body temperature. The structures of the Rh/HEWL adduct formed at 20 °C (obtained from data collected at 100 K) and at 37 °C under the same experimental conditions are very similar, with metal binding sites that are conserved. However, metal-containing fragment occupancy is higher in the structure obtained at 37 °C, suggesting a role of temperature in defining the protein metalation process.
桨轮二铑配合物是细胞毒性化合物,也用作催化剂和用于形成基于铑的人工金属酶。当在20℃用金属化合物处理蛋白质晶体时,模型蛋白鸡蛋清溶菌酶(HEWL)与四乙酸二铑([Rh(μ - OCCH)])形成的加合物的低温结构表明,[Rh(μ - OCCH)]与HEWL反应时部分分解;在pH 4.5的20%乙二醇、0.100 M乙酸钠和0.600 M硝酸钠中,二聚体Rh - Rh单元结合Asp18的侧链和C末端羧酸盐,单金属片段配位Arg14和His15的侧链,而在0.010 M HEPES pH 7.5和2.00 M甲酸钠中,二聚体Rh - Rh单元结合Asn93和Lys96的侧链、C末端羧酸盐和Asp101,单金属片段结合Lys33和His15的侧链。为了验证这种金属药物与蛋白质的结合在体温下是否也会发生,在37℃于0.010 M HEPES pH 7.5和2.00 M甲酸钠中培养HEWL晶体,并在相同温度下用[Rh(μ - OCCH)]浸泡。在37℃对这些晶体收集的X射线衍射数据表明,[Rh(μ - OCCH)]在体温下与蛋白质反应。在相同实验条件下,20℃(从100 K收集的数据获得)和37℃形成的Rh/HEWL加合物的结构非常相似,金属结合位点是保守的。然而,在37℃获得的结构中含金属片段占有率更高,表明温度在确定蛋白质金属化过程中起作用。