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用于量化微生物聚羟基脂肪酸酯的先进方法。

State-of-the-art methods for quantifying microbial polyhydroxyalkanoates.

作者信息

Conners Eric M, Bose Arpita

机构信息

Department of Biology, Washington University in St. Louis, St. Louis, Missouri, USA.

出版信息

Appl Environ Microbiol. 2025 Sep 17;91(9):e0027425. doi: 10.1128/aem.00274-25. Epub 2025 Aug 5.

DOI:10.1128/aem.00274-25
PMID:40762480
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12442350/
Abstract

Polyhydroxyalkanoates are a diverse class of microbially synthesized polymers that are used to make bioplastics with a wide range of applications. As interest in polyhydroxyalkanoates (PHAs) grows, researchers are faced with a challenge: how best to use the resources at their disposal to reliably quantify PHA produced by their microbe(s) of choice. Investigators must weigh the pros and cons of each method against logistical constraints (e.g., time, money, and equipment) and technical concerns (e.g., accuracy and sensitivity). At the same time, the broader community of scientists researching PHAs should aspire to land on a set of best practices. To this end, we must continually audit our methods. Here, we offer readers a snapshot of popular and emerging approaches for quantifying PHA in the lab. For each method, we provide an overview list the primary equipment, briefly describe the methods, including improvements or iterations, and discuss the pros and cons of the approach. Along the way, we highlight gaps in research and make recommendations about best practices and future directions.

摘要

聚羟基脂肪酸酯是一类多样的微生物合成聚合物,用于制造具有广泛应用的生物塑料。随着对聚羟基脂肪酸酯(PHA)的兴趣日益增长,研究人员面临着一个挑战:如何最好地利用手头资源,可靠地定量所选微生物产生的PHA。研究人员必须根据后勤限制(如时间、资金和设备)和技术问题(如准确性和灵敏度)权衡每种方法的利弊。与此同时,研究PHA的更广泛科学界应致力于形成一套最佳实践方法。为此,我们必须不断审视我们的方法。在此,我们向读者简要介绍实验室中用于定量PHA的流行方法和新兴方法。对于每种方法,我们提供一个概述,列出主要设备,简要描述方法,包括改进或迭代,并讨论该方法的优缺点。在此过程中,我们突出研究中的差距,并就最佳实践和未来方向提出建议。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bbc/12442350/ed34318a27b8/aem.00274-25.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bbc/12442350/ed34318a27b8/aem.00274-25.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bbc/12442350/ed34318a27b8/aem.00274-25.f001.jpg

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本文引用的文献

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Non-invasive and real-time monitoring of polyhydroxyalkanoates production using two-dimensional fluorescence spectroscopy.采用二维荧光光谱法对聚羟基烷酸酯生产进行无创实时监测。
J Environ Manage. 2024 Nov;370:122545. doi: 10.1016/j.jenvman.2024.122545. Epub 2024 Sep 20.
2
The phototrophic purple non-sulfur bacteria Rhodomicrobium spp. are novel chassis for bioplastic production.光合紫色非硫细菌 Rhodomicrobium spp. 是生物塑料生产的新型底盘。
Microb Biotechnol. 2024 Aug;17(8):e14552. doi: 10.1111/1751-7915.14552.
3
Overexpression of RuBisCO form I and II genes in TIE-1 augments polyhydroxyalkanoate production heterotrophically and autotrophically.
TIE-1 过表达 RuBisCO 形式 I 和 II 基因可增强聚羟基烷酸酯的异养和自养生产。
Appl Environ Microbiol. 2024 Sep 18;90(9):e0143824. doi: 10.1128/aem.01438-24. Epub 2024 Aug 20.
4
Polyhydroxyalkanoate recovery overview: properties, characterizations, and extraction strategies.聚羟基烷酸酯回收概述:性质、特性分析和提取策略。
Chemosphere. 2024 May;356:141950. doi: 10.1016/j.chemosphere.2024.141950. Epub 2024 Apr 8.
5
Evaluation and optimization of FTIR spectroscopy to quantify PHA production by municipal wastewater sludge.评估和优化傅里叶变换红外光谱法以量化城市污水污泥中 PHAs 的产量。
Spectrochim Acta A Mol Biomol Spectrosc. 2024 May 5;312:124012. doi: 10.1016/j.saa.2024.124012. Epub 2024 Feb 10.
6
Polyhydroxyalkanoates bioproduction from bench to industry: Thirty years of development towards sustainability.聚羟基烷酸酯的生物生产从实验室到工业:三十年来朝着可持续发展的方向发展。
Bioresour Technol. 2024 Feb;393:130149. doi: 10.1016/j.biortech.2023.130149. Epub 2023 Dec 2.
7
Evaluation of polyhydroxyalkanoate (PHA) synthesis by Pichia sp. TSLS24 yeast isolated in Vietnam.评价在越南北部分离得到的酵母 Pichia sp. TSLS24 合成聚羟基烷酸酯(PHA)。
Sci Rep. 2023 Feb 23;13(1):3137. doi: 10.1038/s41598-023-28220-z.
8
A review on poly(3-hydroxybutyrate--3-hydroxyhexanoate) [P(3HB--3HHx)] and genetic modifications that affect its production.聚(3-羟基丁酸酯-3-羟基己酸酯)[P(3HB-3HHx)]及其影响其生产的基因修饰综述。
Front Bioeng Biotechnol. 2022 Dec 5;10:1057067. doi: 10.3389/fbioe.2022.1057067. eCollection 2022.
9
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Polymers (Basel). 2022 Nov 15;14(22):4928. doi: 10.3390/polym14224928.
10
Characterization of Polyhydroxybutyrate, PHB, Synthesized by Newly Isolated Haloarchaea spp.新型嗜盐古菌合成聚羟基丁酸酯(PHB)的特性研究
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