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靶向BRD4的小分子ZL0580的作用机制及对HIV的抑制作用

Mechanistic insights and HIV suppression by the BRD4-targeting small molecule ZL0580.

作者信息

Kumar Naveen, Ma Zonghui, Long Fuquan, Bonam Srinivasa Reddy, Lai Hsien-Tsung, Wu Shwu-Yuan, Chen Haiying, Hazell Nicholas C, Bei Jiani, Liu Xuefeng, Wei Zhi, Chiang Cheng-Ming, Zhou Jia, Hu Haitao

机构信息

Department of Microbiology and Immunology, University of Texas Medical Branch, Galveston, Texas, USA 77555.

Chemical Biology Program, Department of Pharmacology and Toxicology, University of Texas Medical Branch, Galveston, Texas, USA 77555.

出版信息

bioRxiv. 2025 Aug 14:2025.08.14.670267. doi: 10.1101/2025.08.14.670267.

DOI:10.1101/2025.08.14.670267
PMID:40832229
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12363948/
Abstract

Epigenetic suppression and durable silencing of HIV represent a promising strategy to achieve ART-free remission, consistent with the "block and lock" HIV cure paradigm. BRD4 is a host epigenetic reader and plays a critical role in HIV transcriptional regulation. We previously identified ZL0580, a first-in-class BRD4-selective small molecule distinct from the pan-BET inhibitor JQ1, which induces HIV epigenetic suppression. However, detailed molecular mechanisms, pharmacokinetics (PK), and HIV-suppressive efficacy of ZL0580 remain undefined. Here, we show that ZL0580 selectively targets BRD4 bromodomain 1 (BD1) through interaction with a key glutamic acid residue (E151), as determined by structural modeling and mutagenesis. Transcriptomic profiling by RNA-seq reveals that ZL0580 and JQ1 induce opposing gene expression programs, consistent with their distinct effects on HIV proviral transcription and latency. In a humanized mouse model of HIV infection, ZL0580 monotherapy, or in combination with ART, potently suppressed active HIV replication, reducing the plasma viremia to nearly undetectable levels, and delayed viral rebound following treatment interruption. Collectively, these findings establish ZL0580 as an epigenetic suppressor of HIV and provide proof-of-concept for its potential as a "block and lock" HIV cure candidate, warranting further optimization and development.

摘要

表观遗传抑制和HIV的持久沉默代表了一种有望实现无抗逆转录病毒治疗缓解的策略,这与“阻断并锁定”的HIV治愈范式一致。BRD4是一种宿主表观遗传阅读器,在HIV转录调控中起关键作用。我们之前鉴定出了ZL0580,这是一种与泛BET抑制剂JQ1不同的、一流的BRD4选择性小分子,它能诱导HIV表观遗传抑制。然而,ZL0580的详细分子机制、药代动力学(PK)以及HIV抑制功效仍不明确。在此,我们表明,通过结构建模和诱变确定,ZL0580通过与关键谷氨酸残基(E151)相互作用选择性靶向BRD4的溴结构域1(BD1)。通过RNA测序进行的转录组分析表明,ZL0580和JQ1诱导相反的基因表达程序,这与它们对HIV前病毒转录和潜伏的不同影响一致。在HIV感染的人源化小鼠模型中,ZL0580单药治疗或与抗逆转录病毒治疗联合使用,能有效抑制活跃的HIV复制,将血浆病毒血症降低到几乎检测不到的水平,并延迟治疗中断后的病毒反弹。总体而言,这些发现确立了ZL0580作为HIV的表观遗传抑制剂,并为其作为“阻断并锁定”HIV治愈候选药物的潜力提供了概念验证,值得进一步优化和开发。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/21accc0e4036/nihpp-2025.08.14.670267v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/e4e302a71e75/nihpp-2025.08.14.670267v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/783bf8e2a004/nihpp-2025.08.14.670267v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/01d7ca3880d5/nihpp-2025.08.14.670267v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/ed898f20dfbd/nihpp-2025.08.14.670267v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/9d9338124401/nihpp-2025.08.14.670267v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/21accc0e4036/nihpp-2025.08.14.670267v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/e4e302a71e75/nihpp-2025.08.14.670267v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/783bf8e2a004/nihpp-2025.08.14.670267v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/01d7ca3880d5/nihpp-2025.08.14.670267v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/ed898f20dfbd/nihpp-2025.08.14.670267v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/9d9338124401/nihpp-2025.08.14.670267v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e7a2/12363948/21accc0e4036/nihpp-2025.08.14.670267v1-f0006.jpg

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本文引用的文献

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Nat Commun. 2025 May 7;16(1):4226. doi: 10.1038/s41467-025-59398-7.
2
IDR-targeting compounds suppress HPV genome replication via disruption of phospho-BRD4 association with DNA damage response factors.靶向 IDR 的化合物通过破坏磷酸化 BRD4 与 DNA 损伤反应因子的结合来抑制 HPV 基因组复制。
Mol Cell. 2024 Jan 18;84(2):202-220.e15. doi: 10.1016/j.molcel.2023.11.022. Epub 2023 Dec 15.
3
Transient CD4+ T cell depletion during suppressive ART reduces the HIV reservoir in humanized mice.
抑制性 ART 期间短暂的 CD4+T 细胞耗竭可减少人源化小鼠中的 HIV 储存库。
PLoS Pathog. 2023 Dec 6;19(12):e1011824. doi: 10.1371/journal.ppat.1011824. eCollection 2023 Dec.
4
BRD4-PRC2 represses transcription of T-helper 2-specific negative regulators during T-cell differentiation.BRD4-PRC2 抑制 T 细胞分化过程中 T 辅助 2 特异性负调控因子的转录。
EMBO J. 2023 Mar 15;42(6):e111473. doi: 10.15252/embj.2022111473. Epub 2023 Jan 31.
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BRD4 and MYC: power couple in transcription and disease.BRD4 和 MYC:转录和疾病中的“黄金搭档”。
FEBS J. 2023 Oct;290(20):4820-4842. doi: 10.1111/febs.16580. Epub 2022 Aug 3.
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Discovery, X-ray Crystallography, and Anti-inflammatory Activity of Bromodomain-containing Protein 4 (BRD4) BD1 Inhibitors Targeting a Distinct New Binding Site.发现、X 射线晶体学和含溴结构域蛋白 4(BRD4)BD1 抑制剂的抗炎活性,该抑制剂针对一个独特的新结合位点。
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Modulation of BRD4 in HIV epigenetic regulation: implications for finding an HIV cure.调控 BRD4 在 HIV 表观遗传调控中的作用:寻找 HIV 治愈方法的意义。
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Block-And-Lock: New Horizons for a Cure for HIV-1.阻断与锁定:治愈HIV-1的新视野
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