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酸枣中HMGR基因家族的全基因组鉴定及盐胁迫响应表达动态

Genome-Wide identification and salt stress-responsive expression dynamics of the HMGR gene family in Ziziphus jujuba var. spinosa.

作者信息

Tang Xiaohan, Ma Xiaojun, Cao Jun, Wang Xinhong, Li Xuexiang, Yang Xiaozhou, Shu Jing

机构信息

College of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.

出版信息

PLoS One. 2025 Aug 20;20(8):e0330439. doi: 10.1371/journal.pone.0330439. eCollection 2025.

Abstract

Terpenoids are critical components of plant environmental adaptation mechanisms. They also exhibit significant therapeutic potential in herbal medicine. 3-Hydroxy-3-methylglutaryl coenzyme A reductase (HMGR), a pivotal rate-limiting enzyme governing the initial stage of the mevalonate (MVA) pathway in triterpene saponin biosynthesis, remains uncharacterized in Ziziphus jujuba var. spinosa. Through genome-wide and molecular analysis, we systematically identified ZjHMGR isoforms and revealed differential tissue-specific expression patterns and significant salt stress-responsive regulation across identified isoforms. Our findings reveal three evolutionarily conserved ZjHMGR isoforms with a complete HMG-CoA reductase domain and closely related to Populus trichocarpa. Collinearity analysis revealed two collinear gene pairs, and purifying selection was identified as the primary evolutionary force acting on the ZjHMGR gene family. Cis-acting element analysis revealed that ZjHMGR gene family enriched MYB-related, TC-rich repeats, light- and hormone-responsive elements, suggesting transcriptional regulation by environmental stimuli and phytohormones. Spatiotemporal expression analysis via qRT-PCR revealed differential transcriptional patterns of ZjHMGR members, with pronounced upregulation under ABA, MeJA, and light induction. Saline stress disrupted the growth of wild jujube seedlings while activating ZjHMGR expression alongside other MVA pathway genes. Overexpression of ZjHMGR enhances salt stress resistance in Arabidopsis thaliana. This study lays the foundation for further investigations into the molecular mechanisms of the ZjHMGR gene family concerning saponin biosynthesis, phytohormone interactions, and salt tolerance in wild jujube.

摘要

萜类化合物是植物环境适应机制的关键组成部分。它们在草药中也具有显著的治疗潜力。3-羟基-3-甲基戊二酰辅酶A还原酶(HMGR)是三萜皂苷生物合成中甲羟戊酸(MVA)途径初始阶段的关键限速酶,在酸枣中尚未得到表征。通过全基因组和分子分析,我们系统地鉴定了ZjHMGR异构体,揭示了不同的组织特异性表达模式以及所鉴定异构体之间显著的盐胁迫响应调节。我们的研究结果揭示了三种进化上保守的ZjHMGR异构体,它们具有完整的HMG-CoA还原酶结构域,并且与毛果杨密切相关。共线性分析揭示了两个共线基因对,纯化选择被确定为作用于ZjHMGR基因家族的主要进化力量。顺式作用元件分析表明,ZjHMGR基因家族富含MYB相关、富含TC重复序列、光和激素响应元件,表明其受环境刺激和植物激素的转录调控。通过qRT-PCR进行的时空表达分析揭示了ZjHMGR成员的不同转录模式,在ABA、茉莉酸甲酯和光诱导下显著上调。盐胁迫破坏了酸枣幼苗的生长,同时激活了ZjHMGR以及其他MVA途径基因的表达。ZjHMGR的过表达增强了拟南芥的耐盐性。本研究为进一步探究ZjHMGR基因家族在酸枣皂苷生物合成、植物激素相互作用和耐盐性方面的分子机制奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3db/12367118/4954216d09f9/pone.0330439.g001.jpg

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