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新种和新种,从红藻(藻属)中分离出的两种新型细菌。

sp. nov. and sp. nov., two novel bacteria isolated from red macroalgae ( sp.).

作者信息

Fan Si-Jia, Zhang Han-Zhe, Pan Bei, Liu Tian-He, Lu De-Chen, Du Zong-Jun

机构信息

Marine College, Shandong University, Weihai, Shandong, 264209, PR China.

Joint Science College, Shandong University, Weihai, Shandong, 264209, PR China.

出版信息

Int J Syst Evol Microbiol. 2025 Sep;75(9). doi: 10.1099/ijsem.0.006903.

Abstract

Two Gram-stain-negative and rod-shaped bacteria, designated as RZ5 and RZ22, isolated from a red macroalgae sample, were characterized by a polyphasic approach to clarify their taxonomic position. Strain RZ5 grew at 4-33 °C (optimum, 25-28 °C), pH 6.5-8.5 (optimum, 7.0-8.0) and in 0.5-5.0% (w/v) NaCl (optimum, 1.0%). Strain RZ22 grew at 4-28 °C (optimum, 20-25 °C), pH 6.5-8.5 (optimum, 7.0-8.0) and in 2.0-5.0% (w/v) NaCl (optimum, 3.0%). Strain RZ5 possessed a flagellum and was motile, while strain RZ22 lacked a flagellum and was non-motile. Phylogenetic analysis based on 16S rRNA gene sequences indicated that both isolates belonged to the genus and were most closely related to M1A1 (98.1%) and DSM 10704 (97.1%) for strains RZ5 and RZ22, respectively. The predominant fatty acids of both strains were C and summed feature 3 (C 7/C 6). The major polar lipids for strain RZ5 comprised phosphatidylethanolamine (PE) and glycolipids (GLs), while those for strain RZ22 comprised PE, diphosphatidylglycerol and GLs. The average nt identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strains RZ5 and RZ22 were 85.4% and 18.9%, respectively. Strain RZ5 had ANI values of 84.3-85.5% and dDDH values of 18.3-21.3% to members of the genus . Strain RZ22 had ANI values of 84.2-85.2% and dDDH values of 18.4-22.1% to members of the genus . The G+C content of the genomic DNA of strains RZ5 and RZ22 was 36.7 mol% and 35.6 mol%, respectively. Strains RZ5 and RZ22 possessed ubiquinone-8 as the sole respiratory quinone. The phylogenetic analyses and genomic comparisons, combined with phenotypic and chemotaxonomic features, strongly supported that the two strains should be classified as representing two novel species of the genus , for which we propose the names sp. nov. (type strain RZ5=JCM 33153=MCCC 1H00360) and sp. nov. (type strain RZ22=JCM 33154=MCCC 1H00361).

摘要

从一份红藻样本中分离出两株革兰氏阴性杆状细菌,分别命名为RZ5和RZ22,采用多相分类法对其进行表征,以明确它们的分类地位。菌株RZ5在4-33 °C(最适温度为25-28 °C)、pH 6.5-8.5(最适pH为7.0-8.0)以及0.5-5.0%(w/v)NaCl(最适浓度为1.0%)的条件下生长。菌株RZ22在4-28 °C(最适温度为20-25 °C)、pH 6.5-8.5(最适pH为7.0-8.0)以及2.0-5.0%(w/v)NaCl(最适浓度为3.0%)的条件下生长。菌株RZ5具有鞭毛且能运动,而菌株RZ22没有鞭毛,不能运动。基于16S rRNA基因序列的系统发育分析表明,这两株分离菌均属于该属,且菌株RZ5和RZ22分别与M1A1(98.1%)和DSM 10704(97.1%)关系最为密切。两株菌的主要脂肪酸均为C和总和特征3(C 7/C 6)。菌株RZ5的主要极性脂类包括磷脂酰乙醇胺(PE)和糖脂(GLs),而菌株RZ22的主要极性脂类包括PE、二磷脂酰甘油和GLs。菌株RZ5和RZ22之间的平均核苷酸同一性(ANI)和数字DNA-DNA杂交(dDDH)值分别为85.4%和18.9%。菌株RZ5与该属其他成员的ANI值为84.3-85.5%,dDDH值为18.3-21.3%。菌株RZ22与该属其他成员的ANI值为84.2-85.2%,dDDH值为18.4-22.1%。菌株RZ5和RZ22基因组DNA的G+C含量分别为36.7 mol%和35.6 mol%。菌株RZ5和RZ22均以泛醌-8作为唯一的呼吸醌。系统发育分析和基因组比较,结合表型和化学分类特征,有力地支持这两株菌应被分类为该属的两个新物种,我们提议将其命名为sp. nov.(模式菌株RZ5=JCM 33153=MCCC 1H00360)和sp. nov.(模式菌株RZ22=JCM 33154=MCCC 1H00361)。

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