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(线虫纲:垫刃目)属的分子系统发育与物种界定,兼新种描述及该属在美国生物地理学的笔记

Molecular Phylogeny and Species Delimiting for the Genus (Nematoda: Tylenchida) with Description of sp. n. and Notes on Biogeography of the Genus in the United States.

作者信息

Subbotin Sergei A, Kantor Mihail, Consoli Erika, Lyndby Niclas H, Michaud Amy, Handoo Zafar, Inserra Renato N

机构信息

Plant Pest Diagnostic Center, California Department of Food and Agriculture, 3294 Meadowview Road, Sacramento, CA 95832, USA.

Department of Entomology and Nematology, University of California, Davis, CA 95616, USA.

出版信息

Int J Mol Sci. 2025 Sep 1;26(17):8501. doi: 10.3390/ijms26178501.

DOI:10.3390/ijms26178501
PMID:40943424
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12428980/
Abstract

Lance nematodes, spp., feed on the roots of many kinds of plants, including agronomic crops. In this study, morphological and molecular analyses of several species and populations are provided. We were able to collect and characterize the topotype materials of from Arlington, Virginia; syn. n. from Nichols, South Carolina; and from Pensacola, Florida, and several additional populations and species from the United States, Israel, and India. Phylogenetic analyses of several hundred sequences of the D2-D3 expansion regions of 28S rRNA, ITS rRNA, and COI genes of species obtained from published and original datasets were given. Fifty-three new D2-D3 of 28S rRNA, 43 new ITS rRNA, and 47 new sequences from 23 isolates of spp. and one isolate of were obtained in this study. New molecular identities for and were proposed. syn. n. was considered a synonym of based on the morphological and molecular similarity of these two species. Analysis of morphology and molecular data did not reveal significant differences among syn. n., syn. n., and , and the first two species were synonymized with . A new species, sp. n., was described from many locations in Florida, USA. It was separated from other representatives of the genus by its morphological and molecular characteristics. Maps with geographical distribution of several lance nematode species in North America were reconstructed based on published and original molecular identification of samples.

摘要

长矛线虫属的线虫以包括农作物在内的多种植物的根为食。在本研究中,提供了对几个物种和种群的形态学和分子分析。我们能够收集并鉴定来自弗吉尼亚州阿灵顿的正模标本材料;来自南卡罗来纳州尼科尔斯的新同物异名;来自佛罗里达州彭萨科拉的标本,以及来自美国、以色列和印度的其他几个种群和物种。对从已发表和原始数据集中获得的该物种28S rRNA、ITS rRNA和COI基因的D2 - D3扩展区域的数百个序列进行了系统发育分析。在本研究中,从23个长矛线虫属分离株和1个[未提及的线虫属]分离株中获得了53个新的28S rRNA的D2 - D3序列、43个新的ITS rRNA序列和47个新的[未提及的基因]序列。提出了[未提及的两个物种]的新分子鉴定。基于这两个物种的形态学和分子相似性,[未提及的新同物异名]被认为是[未提及的物种]的同物异名。形态学和分子数据分析未揭示[未提及的新同物异名]、[未提及的新同物异名]和[未提及的物种]之间的显著差异,前两个物种被归为[未提及的物种]的同物异名。从美国佛罗里达州的多个地点描述了一个新物种,[未提及的新物种名称]。它通过其形态学和分子特征与该属的其他代表物种区分开来。基于已发表的和原始的样本分子鉴定,重建了北美几种长矛线虫物种的地理分布图。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/35f8b776baea/ijms-26-08501-g007.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/02c26c6d941b/ijms-26-08501-g0A1.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/d983e6e16c35/ijms-26-08501-g0A4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/a0c15ce9ed1c/ijms-26-08501-g0A5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/29c1571fdf7a/ijms-26-08501-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/ee26402108fb/ijms-26-08501-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/81d3cbc5bc86/ijms-26-08501-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/dec57e2f526e/ijms-26-08501-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/6f1a620feb26/ijms-26-08501-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2a/12428980/f1e355db9716/ijms-26-08501-g006.jpg
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