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基于机器学习和可解释人工智能的高灵敏度光子晶体光纤表面等离子体共振生物传感器的设计优化

Design optimization of high-sensitivity PCF-SPR biosensor using machine learning and explainable AI.

作者信息

Khatun Mst Rokeya, Islam Md Saiful

机构信息

Institute of Information and Communication Technology (IICT), Bangladesh University of Engineering and Technology (BUET), Dhaka, Bangladesh.

出版信息

PLoS One. 2025 Sep 15;20(9):e0330944. doi: 10.1371/journal.pone.0330944. eCollection 2025.

DOI:10.1371/journal.pone.0330944
PMID:40953064
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12435684/
Abstract

Photonic crystal fiber based surface plasmon resonance (PCF-SPR) biosensors are sophisticated optical sensing platforms that enable precise detection of minute refractive index (RI) variations for various applications. This study introduces a highly sensitive, low-loss, and simply designed PCF-SPR biosensor for label-free analyte detection, operating across a broad RI range of 1.31 to 1.42. In addition to conventional methods, machine learning (ML) regression techniques were integrated to predict key optical properties, while explainable AI (XAI) methods, particularly Shapley Additive exPlanations (SHAP), were used to analyze model outputs and identify the most influential design parameters. This hybrid approach significantly accelerates sensor optimization, reduces computational costs, and improves design efficiency compared to conventional methods. The proposed biosensor achieves impressive performance metrics, including a maximum wavelength sensitivity of 125,000 nm/RIU, amplitude sensitivity of -1422.34 RIU ⁻ ¹, resolution of 8 × 10 ⁻ ⁷ RIU, and a figure of merit (FOM) of 2112.15. ML models demonstrated high predictive accuracy for effective index, confinement loss, and amplitude sensitivity. SHAP analysis revealed that wavelength, analyte refractive index, gold thickness, and pitch are the most critical factors influencing sensor performance. The combination of a simple yet efficient design and advanced ML-driven optimization makes this biosensor a promising candidate for high-precision medical diagnostics, particularly cancer cell detection, and chemical sensing applications.

摘要

基于光子晶体光纤的表面等离子体共振(PCF-SPR)生物传感器是复杂的光学传感平台,能够精确检测各种应用中微小的折射率(RI)变化。本研究介绍了一种用于无标记分析物检测的高灵敏度、低损耗且设计简单的PCF-SPR生物传感器,其在1.31至1.42的宽RI范围内工作。除了传统方法外,还集成了机器学习(ML)回归技术来预测关键光学特性,同时使用可解释人工智能(XAI)方法,特别是Shapley加性解释(SHAP),来分析模型输出并识别最具影响力的设计参数。与传统方法相比,这种混合方法显著加速了传感器优化,降低了计算成本,并提高了设计效率。所提出的生物传感器实现了令人印象深刻的性能指标,包括最大波长灵敏度为125,000 nm/RIU、幅度灵敏度为-1422.34 RIU⁻¹、分辨率为8×10⁻⁷ RIU以及品质因数(FOM)为2112.15。ML模型对有效折射率、限制损耗和幅度灵敏度表现出较高的预测准确性。SHAP分析表明,波长、分析物折射率、金厚度和节距是影响传感器性能的最关键因素。简单而高效的设计与先进的ML驱动优化相结合,使这种生物传感器成为高精度医学诊断,特别是癌细胞检测和化学传感应用的有前途的候选者。

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