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溶菌酶的酶学和免疫化学特性。通过“表面模拟”合成精确定义二硫键30-115周围的抗原位点(位点3)。

Enzymic and immunochemical properties of lysozyme. Accurate definition of the antigenic site around the disulphide bridge 30-115 (site 3) by 'surface-simulation' synthesis.

作者信息

Lee C L, Atassi M Z

出版信息

Biochem J. 1977 Dec 1;167(3):571-81. doi: 10.1042/bj1670571.

DOI:10.1042/bj1670571
PMID:603622
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1183703/
Abstract
  1. Previous reports from this laboratory have shown that both Lys-33 and Lys-116 are parts of an antigenic site in native lysozyme. Similar studies of tyrosine derivatives indicated that one or both of Tyr-20 and Tyr-23 are located in or very close to an antigenic site in lysozyme. The site, which was located around the disulphide bridge 30-115, was recently shown unequivocally to include the residues Tyr-20, Arg-21, Lys-116, Asn-113, Arg-114, Phe-34 and Lys-33. This was confirmed by the ;surface-simulation' synthetic approach that we have recently developed, in which the foregoing eight surface residues were directly linked via peptide bonds, with intervening spacers where appropriate, into a single peptide. The peptide does not exist in native lysozyme, but simulates a surface region of it. 2. In the present work several surface-simulation peptides were synthesized representing various parts of the region, to determine the minimum structural feature that retains full antigenic reactivity and to investigate if the spatially constructed antigenic site has a preferred direction. 3. The peptide Lys-Asn-Arg-Gly-Phe-Lys exhibited a remarkable inhibitory activity towards the immune reaction of lysozyme and accounted entirely for the maximum expected reactivity of the site in the native protein (i.e. about one-third of the total lysozyme reactivity). An immunoadsorbent of the peptide bound about one-third of the total antibody to lysozyme. 4. The residues Tyr-20 and Arg-21 are not part of the site. The previously reported immunochemical effect observed on nitration of Tyr-20 was due to a deleterious ionic effect exerted by the modified tyrosine residue on the adjacent Lys-96, which is in an entirely different antigenic site of lysozyme. Thus the modification of Tyr-20 impairs the reactivity of an adjacent antigenic site, even though the residue itself is not part of a site. The conformational and immunochemical implications of this finding are discussed. 5. The antigenic site therefore comprises the five spatially adjacent residues Lys-116, Asn-113, Arg-114, Phe-34, Lys-33. The antigenic site exhibited a preferred direction (Lys-116 to Lys-33), since the reverse surface-simulation synthetic sequence was immunochemically inefficient. The site describes a line which circumscribes part [2.1nm in C((alpha))-C((alpha)) distance from Lys-116 to Lys-33] of the surface of the molecule.
摘要
  1. 本实验室之前的报告表明,赖氨酸-33和赖氨酸-116都是天然溶菌酶中一个抗原位点的组成部分。对酪氨酸衍生物的类似研究表明,酪氨酸-20和酪氨酸-23中的一个或两个位于溶菌酶的一个抗原位点内或非常靠近该位点。该位点位于二硫键30 - 115周围,最近已明确显示其包括酪氨酸-20、精氨酸-21、赖氨酸-116、天冬酰胺-113、精氨酸-114、苯丙氨酸-34和赖氨酸-33这些残基。这通过我们最近开发的“表面模拟”合成方法得到了证实,在该方法中,上述八个表面残基通过肽键直接相连,并在适当位置插入间隔基团,形成一个单一的肽。该肽在天然溶菌酶中不存在,但模拟了它的一个表面区域。2. 在本研究中,合成了几种代表该区域不同部分的表面模拟肽,以确定保留完全抗原反应性的最小结构特征,并研究空间构建的抗原位点是否有一个优先方向。3. 肽赖氨酸-天冬酰胺-精氨酸-甘氨酸-苯丙氨酸-赖氨酸对溶菌酶的免疫反应表现出显著的抑制活性,并且完全占了天然蛋白质中该位点预期最大反应性的份额(即约占溶菌酶总反应性的三分之一)。该肽的免疫吸附剂结合了约三分之一的抗溶菌酶总抗体。4. 酪氨酸-20和精氨酸-21残基不是该位点的组成部分。先前报道的对酪氨酸-20硝化时观察到的免疫化学效应,是由于修饰的酪氨酸残基对相邻的赖氨酸-96产生了有害的离子效应,而赖氨酸-96位于溶菌酶的一个完全不同的抗原位点。因此,酪氨酸-20的修饰损害了相邻抗原位点的反应性,尽管该残基本身不是一个位点的组成部分。讨论了这一发现的构象和免疫化学意义。5. 因此,抗原位点由空间相邻的五个残基赖氨酸-116、天冬酰胺-113、精氨酸-114、苯丙氨酸-34、赖氨酸-33组成。该抗原位点表现出一个优先方向(从赖氨酸-116到赖氨酸-33),因为反向的表面模拟合成序列在免疫化学上效率较低。该位点描绘了一条环绕分子表面一部分的线(从赖氨酸-116到赖氨酸-
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/933a/1183703/bbf08acbcf78/biochemj00499-0082-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/933a/1183703/bbf08acbcf78/biochemj00499-0082-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/933a/1183703/bbf08acbcf78/biochemj00499-0082-a.jpg

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Biochem J. 1977 Dec 1;167(3):571-81. doi: 10.1042/bj1670571.
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Design of peptide enzymes (pepzymes): surface-simulation synthetic peptides that mimic the chymotrypsin and trypsin active sites exhibit the activity and specificity of the respective enzyme.肽酶(pepzyme)的设计:模拟胰凝乳蛋白酶和胰蛋白酶活性位点的表面模拟合成肽表现出相应酶的活性和特异性。
Proc Natl Acad Sci U S A. 1993 Sep 1;90(17):8282-6. doi: 10.1073/pnas.90.17.8282.
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Haemoglobin binding with haptoglobin. Unequivocal demonstration that the beta-chains of human haemoglobin bind to haptoglobin.血红蛋白与触珠蛋白结合。明确证明人血红蛋白的β链与触珠蛋白结合。
Biochem J. 1980 Jan 1;185(1):285-7. doi: 10.1042/bj1850285.
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本文引用的文献

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Immunochemistry of sperm-whale myoglobins prepared with various modified porphyrins and metalloporphyrins.用各种改性卟啉和金属卟啉制备的抹香鲸肌红蛋白的免疫化学。
Biochem J. 1967 Apr;103(1):29-35. doi: 10.1042/bj1030029.
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Conversion of 3-nitrotyrosine to 3-aminotyrosine in peptides and proteins.肽和蛋白质中3-硝基酪氨酸向3-氨基酪氨酸的转化。
Biochem Biophys Res Commun. 1967 Apr 7;27(1):20-5. doi: 10.1016/s0006-291x(67)80033-0.
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Immunochemistry of sperm whale myoglobin. 3. Modification of the three tyrosine residues and their role in the conformation and differentiation of their roles in the antigenic reactivity.
Binding with lysozyme of antibodies against surface-simulation peptides representing the lysozyme antigenic sites.
针对代表溶菌酶抗原位点的表面模拟肽的抗体与溶菌酶的结合。
Biochem J. 1982 Mar 1;201(3):669-72. doi: 10.1042/bj2010669.
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Localization, synthesis, and activity of an antigenic site on influenza virus hemagglutinin.流感病毒血凝素抗原位点的定位、合成与活性
Proc Natl Acad Sci U S A. 1983 Feb;80(3):840-4. doi: 10.1073/pnas.80.3.840.
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The antibody response to myoglobin is independent of the immunized species. Analysis in terms of replacements in the antigenic sites and in environmental residues of the cross-reactions of fifteen myoglobins with sperm-whale myoglobin antisera raised in different species.对肌红蛋白的抗体反应与免疫物种无关。分析了在不同物种中产生的十五种肌红蛋白与抹香鲸肌红蛋白抗血清交叉反应的抗原位点和环境残基中的替换情况。
Biochem J. 1980 Dec 1;191(3):681-97. doi: 10.1042/bj1910681.
6
Nearest-neighbour analysis of myoglobin antigenic sites. Nearest-neighbour residues whose replacement can alter the environment of binding-site residue(s) and thus change their characteristics and binding capability.肌红蛋白抗原位点的最近邻分析。其取代可改变结合位点残基环境从而改变其特性和结合能力的最近邻残基。
Biochem J. 1980 Dec 1;191(3):673-80. doi: 10.1042/bj1910673.
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Precise determination of protein antigenic structures has unravelled the molecular immune recognition of proteins and provided a prototype for synthetic mimicking of other protein binding sites.蛋白质抗原结构的精确测定揭示了蛋白质的分子免疫识别,并为其他蛋白质结合位点的合成模拟提供了原型。
Mol Cell Biochem. 1980 Aug 29;32(1):21-43. doi: 10.1007/BF00421293.
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Distance calculation of residues neighbouring to lysozyme antigenic sites. Site-neighbouring residues whose evolutionary substitution can modify the characteristics and binding energy of the sites.溶菌酶抗原位点邻近残基的距离计算。其进化替代可改变抗原位点特征和结合能的位点邻近残基。
Biochem J. 1980 Apr 1;187(1):163-72. doi: 10.1042/bj1870163.
9
Surface-simulation synthesis of the substrate-binding site of an enzyme. Demonstration with trypsin.酶底物结合位点的表面模拟合成。以胰蛋白酶为例进行演示。
Biochem J. 1985 Mar 1;226(2):477-85. doi: 10.1042/bj2260477.
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Antigen presentation of lysozyme: T-cell recognition of peptide and intact protein after priming with synthetic overlapping peptides comprising the entire protein chain.溶菌酶的抗原呈递:用包含整个蛋白质链的合成重叠肽进行致敏后,T细胞对肽和完整蛋白质的识别。
Immunology. 1985 Sep;56(1):103-12.
抹香鲸肌红蛋白的免疫化学。3. 三个酪氨酸残基的修饰及其在构象和抗原反应性中所起作用的分化
Biochemistry. 1968 Sep;7(9):3078-85. doi: 10.1021/bi00849a008.
4
Conformational studies on modified proteins and peptides. IV. Conformation of lysozyme derivatives modified at tyrosine or at tryptophan residues.修饰蛋白质和肽的构象研究。IV. 酪氨酸或色氨酸残基修饰的溶菌酶衍生物的构象
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5
Immunochemistry of sperm whale myoglobin. VI. Preparation and conformational analysis of eight mammalian myoglobins.抹香鲸肌红蛋白的免疫化学。VI. 八种哺乳动物肌红蛋白的制备及构象分析。
Biochim Biophys Acta. 1970 Dec 22;221(3):612-22. doi: 10.1016/0005-2795(70)90233-3.
6
Enzymic and immunochemical properties of lysozyme. IV. Demonstration of conformational differences between alpha-lactalbumin and lysozyme.溶菌酶的酶学与免疫化学性质。IV. α-乳白蛋白与溶菌酶构象差异的证明。
Biochim Biophys Acta. 1971 Apr 27;236(1):131-41. doi: 10.1016/0005-2795(71)90158-9.
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Immunochemistry of sperm whale myoglobin. IV. The role of the arginine residues in the conformation and differentiation of their roles in the antigenic reactivity.抹香鲸肌红蛋白的免疫化学。IV. 精氨酸残基在其构象及抗原反应性中不同作用的分化里的作用。
Biochemistry. 1969 Aug;8(8):3385-94. doi: 10.1021/bi00836a037.
8
Enzymic and immunochemical properties of lysozyme. I. Derivatives modified at tyrosine. Influence of nature of modification on activity.溶菌酶的酶学和免疫化学性质。I. 酪氨酸修饰的衍生物。修饰性质对活性的影响。
Biochemistry. 1969 Apr;8(4):1385-93. doi: 10.1021/bi00832a012.
9
Immunochemistry of sperm whale myoglobin. I. The specific interaction of some tryptic peptides and of peptides containing all the reactive regions of the antigen.抹香鲸肌红蛋白的免疫化学。I. 一些胰蛋白酶肽段以及包含抗原所有反应区域的肽段的特异性相互作用。
Biochemistry. 1968 Feb;7(2):688-98. doi: 10.1021/bi00842a026.
10
Peptides with strong immunochemical inhibitory activity from bovine serum albumin. Application of a novel approach.来自牛血清白蛋白的具有强免疫化学抑制活性的肽。一种新方法的应用。
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