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1
Oxidation of pyrimidine nucleosides and nucleotides by osmium tetroxide.四氧化锇对嘧啶核苷和核苷酸的氧化作用。
Biochem J. 1967 Aug;104(2):686-94. doi: 10.1042/bj1040686.
2
Selective degradation of thymidine and thymine deoxynucleotides.胸腺嘧啶核苷和胸腺嘧啶脱氧核苷酸的选择性降解。
Biochem J. 1966 Jan;98(1):70-7. doi: 10.1042/bj0980070.
3
Osmium-labeled polynucleotides. The reaction of osmium tetroxide with deoxyribonucleic acid and synthetic polynucleotides in the presence of tertiary nitrogen donor ligands.锇标记的多核苷酸。四氧化锇在叔氮供体配体存在下与脱氧核糖核酸及合成多核苷酸的反应。
Biochemistry. 1977 Jan 11;16(1):33-8. doi: 10.1021/bi00620a006.
4
Influence of glutaraldehyde and-or osmium tetroxide on cell volume, ion content, mechanical stability, and membrane permeability of Ehrlich ascites tumor cells.戊二醛和/或四氧化锇对艾氏腹水瘤细胞的细胞体积、离子含量、机械稳定性及膜通透性的影响
J Cell Biol. 1974 Oct;63(1):197-214. doi: 10.1083/jcb.63.1.197.
5
The chemical nature of osmium tetroxide fixation and staining of membranes by x-ray photoelectron spectroscopy.四氧化锇固定的化学性质以及通过X射线光电子能谱对膜进行染色
Biochim Biophys Acta. 1976 Jul 1;436(3):577-92. doi: 10.1016/0005-2736(76)90442-9.
6
Excision of damaged thymine residues from gamma-irradiated poly(dA-dT) by crude extracts of Escherichia coli.利用大肠杆菌粗提取物从γ射线辐照的聚(dA-dT)中切除受损胸腺嘧啶残基
Proc Natl Acad Sci U S A. 1974 Sep;71(9):3532-6. doi: 10.1073/pnas.71.9.3532.
7
Reactions between singlet oxygen and the constituents of nucleic acids. Importance of reactions in photodynamic processes.单线态氧与核酸成分之间的反应。光动力过程中反应的重要性。
Biophys J. 1970 Apr;10(4):305-15. doi: 10.1016/S0006-3495(70)86303-2.
8
Ruthenium red as a stain for electron microscopy. Some new aspects of its application and mode of action.钌红作为电子显微镜染色剂。其应用及作用方式的一些新方面。
Histochemistry. 1979 Nov;64(2):171-87. doi: 10.1007/BF00490097.
9
Oxidation of nucleosides and nucleotides by peroxosulfate ions.过硫酸根离子对核苷和核苷酸的氧化作用。
Nucleic Acids Symp Ser. 1990(22):9-10.
10
Reactivity of pyrimidine nucleosides under the conditions of the pyrimidine sequencing reactions of Maxam and Gilbert.嘧啶核苷在马克萨姆和吉尔伯特嘧啶测序反应条件下的反应活性。
Anal Biochem. 1988 Feb 1;168(2):231-8. doi: 10.1016/0003-2697(88)90312-0.

引用本文的文献

1
Nanopore device-based fingerprinting of RNA oligos and microRNAs enhanced with an Osmium tag.基于纳米孔设备的 RNA 寡核苷酸和 microRNA 的指纹图谱分析,通过锇标记得到增强。
Sci Rep. 2019 Oct 2;9(1):14180. doi: 10.1038/s41598-019-50459-8.
2
Cnersion of 4-thiouracil in amino acid-transfer ribonucleic acid into N4-methyl-cytidine for sequence analysis.将氨基酸转移核糖核酸中的4-硫尿嘧啶转化为N4-甲基胞嘧啶用于序列分析。
Biochem J. 1969 Sep;114(2):30P-31P.
3
The conversion of glyoxyloyl groups into glycyl groups and their formation from maleyl residues.乙醛酰基转化为甘氨酰基以及它们由马来酰残基形成的过程。
Biochem J. 1968 Mar;107(1):124-6. doi: 10.1042/bj1070124.
4
Fixatives and fixation: a review.固定剂与固定:综述
Histochem J. 1969 May;1(4):323-60. doi: 10.1007/BF01003278.

本文引用的文献

1
Chromatographic studies on nucleic acids; the quantitative analysis of ribonucleic acids.核酸的色谱研究;核糖核酸的定量分析。
Biochem J. 1950 May;46(5):509-13. doi: 10.1042/bj0460509.
2
An oligonucleotide mapping procedure and its use in the study of tobacco mosaic virus nucleic acid.一种寡核苷酸图谱分析方法及其在烟草花叶病毒核酸研究中的应用。
Virology. 1960 May;11:236-49. doi: 10.1016/0042-6822(60)90064-7.
3
THE FLUORIMETRIC MICRODETERMINATION OF GLYOXYLIC ACID IN BLOOD, URINE AND BACTERIAL EXTRACTS.血液、尿液和细菌提取物中乙醛酸的荧光微量测定法。
Biochem J. 1965 Jul;96(1):218-23. doi: 10.1042/bj0960218.
4
EVIDENCE FOR THE OCCURRENCE OF A COMMON PENTANUCLEOTIDE SEQUENCE IN THE STRUCTURES OF TRANSFER RIBONUCLEIC ACIDS.转运核糖核酸结构中存在常见五核苷酸序列的证据。
J Biol Chem. 1965 Mar;240:1267-73.
5
NUCLEOTIDES: SEPARATION FROM AN ALKALINE HYDROLYSATE OF RNA BY THIN-LAYER ELECTROPHORESIS.核苷酸:通过薄层电泳从RNA的碱性水解产物中分离出来
Science. 1964 Jun 12;144(3624):1350-1. doi: 10.1126/science.144.3624.1350.
6
A new simple semimicro method for colorimetric determination of urea.一种新的简易半微量比色法测定尿素。
Clin Chem. 1963 Feb;9:102-8.
7
The frequencies of certain sequences of nucleotides in deoxyribonucleic acid.脱氧核糖核酸中特定核苷酸序列的频率。
Biochem J. 1960 Apr;75(1):17-27. doi: 10.1042/bj0750017.
8
Pseudouridine residues resistant to cyanoethylation in yeast transfer ribonucleic acid.酵母转移核糖核酸中对氰乙基化有抗性的假尿苷残基
Biochim Biophys Acta. 1966 Jul 20;123(1):214-6. doi: 10.1016/0005-2787(66)90178-x.
9
Determination of base sequence in nucleic acids with the electron microscope. V. The thymine-specific reactions of osmium tetroxide with deoxyribonucleic acid and its components.用电子显微镜测定核酸中的碱基序列。V. 四氧化锇与脱氧核糖核酸及其组分的胸腺嘧啶特异性反应。
Biochemistry. 1966 Jul;5(7):2283-8. doi: 10.1021/bi00871a017.
10
Selective degradation of thymidine and thymine deoxynucleotides.胸腺嘧啶核苷和胸腺嘧啶脱氧核苷酸的选择性降解。
Biochem J. 1966 Jan;98(1):70-7. doi: 10.1042/bj0980070.

四氧化锇对嘧啶核苷和核苷酸的氧化作用。

Oxidation of pyrimidine nucleosides and nucleotides by osmium tetroxide.

作者信息

Burton K

出版信息

Biochem J. 1967 Aug;104(2):686-94. doi: 10.1042/bj1040686.

DOI:10.1042/bj1040686
PMID:6048808
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1270638/
Abstract
  1. Pyrimidine nucleosides such as thymidine, uridine or cytidine are oxidized readily at 0 degrees by osmium tetroxide in ammonium chloride buffer. There is virtually no oxidation in bicarbonate buffer of similar pH. Oxidation of 1-methyluracil yields 5,6-dihydro-4,5,6-trihydroxy-1-methyl-2-pyrimidone. 2. Osmium tetroxide and ammonia react reversibly in aqueous solution to form a yellow 1:1 complex, probably OsO(3)NH. A second molecule of ammonia must be involved in the oxidation of UMP since the rate of this reaction is approximately proportional to the square of the concentration of unprotonated ammonia. 3. 4-Thiouridine reacts with osmium tetroxide much more rapidly than does uridine. The changes of absorption spectra are different in sodium bicarbonate buffer and in ammonium chloride buffer. They occur faster in the latter buffer and, under suitable conditions, cytidine is a major product. 4. Polyuridylic acid is oxidized readily by ammoniacal osmium tetroxide, but its oxidation is inhibited by polyadenylic acid. Pyrimidines of yeast amino acid-transfer RNA are oxidized more slowly than the corresponding mononucleosides, especially the thymine residues. Appreciable oxidation can occur without change of sedimentation coefficient.
摘要
  1. 嘧啶核苷,如胸苷、尿苷或胞苷,在氯化铵缓冲液中于0℃时很容易被四氧化锇氧化。在pH值相似的碳酸氢盐缓冲液中几乎不发生氧化。1-甲基尿嘧啶的氧化产物是5,6-二氢-4,5,6-三羟基-1-甲基-2-嘧啶酮。2. 四氧化锇和氨在水溶液中可逆反应形成一种黄色的1:1配合物,可能是OsO(3)NH。UMP的氧化过程中必定涉及第二个氨分子,因为该反应的速率大约与未质子化氨浓度的平方成正比。3. 4-硫尿苷与四氧化锇的反应比尿苷快得多。在碳酸氢钠缓冲液和氯化铵缓冲液中吸收光谱的变化不同。在后者缓冲液中变化更快,在合适条件下,胞苷是主要产物。4. 聚尿苷酸很容易被氨性四氧化锇氧化,但其氧化受到聚腺苷酸的抑制。酵母氨基酸转移RNA中的嘧啶比相应的单核苷氧化得更慢,尤其是胸腺嘧啶残基。在沉降系数不变的情况下也会发生明显的氧化。